RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ASAH1Q13510 395 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 TMEM17Q86X19 198 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 OR2AK2Q8NG84 335 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 OR5AP2Q8NGF4 316 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 R3HDM4Q96D70 268 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 ST6GALNAC5Q9BVH7 336 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 LIN7CQ9NUP9 197 aaKnown RBP13.2□□□□□ -0.3
PKP3-209ENST00000533069 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
PKP3-209ENST00000533069 ELF5Q9UKW6 265 aaPredicted RBP13.2□□□□□ -0.3
PKP3-209ENST00000533069 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
PKP3-209ENST00000533069 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 NCBP2LA6PVI3 153 aaKnown RBP13.19□□□□□ -0.3
PKP3-209ENST00000533069 TRDCB7Z8K6 153 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 IGHG2P01859 326 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 OR3A3P47888 321 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
PKP3-209ENST00000533069 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
PKP3-209ENST00000533069 VAX1Q5SQQ9 334 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 STEAP1BQ6NZ63 245 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 SLC35E3Q7Z769 313 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 FOXRED2Q8IWF2 684 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 ARRDC1Q8N5I2 433 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
PKP3-209ENST00000533069 WNK1Q9H4A3 2382 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 KCNAB3O43448 404 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 RAB3DO95716 219 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 IFNA6P05013 189 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 HLA-DRB3P79483 266 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 CDK10Q15131 360 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 RNASE12Q5GAN4 147 aaKnown RBP13.18□□□□□ -0.3
PKP3-209ENST00000533069 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 Q6ZPA2 131 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 HDHD3Q9BSH5 251 aaPredicted RBP13.18□□□□□ -0.3
PKP3-209ENST00000533069 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
PKP3-209ENST00000533069 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 MEIS3P1A6NDR6 274 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 ITGB1BP1O14713 200 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 FABP7O15540 132 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 LYRM1O43325 122 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 PTTG1O95997 202 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 SLC35B1P78383 322 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 RGS21Q2M5E4 152 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 ZNF833PQ6ZTB9 187 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 COMMD1Q8N668 190 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 Q8N9W7 124 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 MINDY2Q8NBR6 621 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 SNAPC3Q92966 411 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 S1PR3Q99500 378 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 PRRT1Q99946 306 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 GHITMQ9H3K2 345 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 SLC23A1Q9UHI7 598 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 SCP2D1Q9UJQ7 156 aa13.17□□□□□ -0.3
PKP3-209ENST00000533069 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 AP4M1O00189 453 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 CD3DP04234 171 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
PKP3-209ENST00000533069 PF4V1P10720 104 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 ZBTB25P24278 435 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 ECI1P42126 302 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 GPR12P47775 334 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 PDLIM3Q53GG5 364 aaPredicted RBP13.16□□□□□ -0.3
PKP3-209ENST00000533069 OVCH2Q7RTZ1 564 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 EDARADDQ8WWZ3 215 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 CABLES2Q9BTV7 478 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 GON7Q9BXV9 100 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 PLSCR3Q9NRY6 295 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 SLC2A8Q9NY64 477 aa13.16□□□□□ -0.3
PKP3-209ENST00000533069 ZNF230Q9UIE0 474 aaPredicted RBP13.16□□□□□ -0.3
PKP3-209ENST00000533069 RAB29O14966 203 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 HRH1P35367 487 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 IFITM3Q01628 133 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 KHDC1LQ5JSQ8 128 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 STPG2Q8N412 459 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 POC5Q8NA72 575 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 NOL4LQ96MY1 436 aaPredicted RBP13.15□□□□□ -0.3
PKP3-209ENST00000533069 NABP2Q9BQ15 211 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
PKP3-209ENST00000533069 HRASLSQ9HDD0 168 aa13.15□□□□□ -0.3
PKP3-209ENST00000533069 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 PLA2G10O15496 165 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 HSPA12AO43301 675 aa13.14□□□□□ -0.31
PKP3-209ENST00000533069 FCER2P06734 321 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms