RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 H7C2Y5 167 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 FGF16O43320 207 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 PROK1P58294 105 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 FXYD4P59646 89 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 Q8N9W7 124 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 OR8H1Q8NGG4 311 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 SECTM1Q8WVN6 248 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 ZNF2Q9BSG1 426 aaPredicted RBP19.72■□□□□ 0.75
USP48-214ENST00000532737 CCL28Q9NRJ3 127 aa19.72■□□□□ 0.75
USP48-214ENST00000532737 RBMX2Q9Y388 322 aaKnown RBP19.72■□□□□ 0.75
USP48-214ENST00000532737 M0QYG6 137 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 SLC22A5O76082 557 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 CNTFRP26992 372 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 DUTP33316 252 aaKnown RBP19.71■□□□□ 0.75
USP48-214ENST00000532737 THBS3P49746 956 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 CCDC190Q86UF4 302 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 OR6Q1Q8NGQ2 317 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 SLC5A7Q9GZV3 580 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 SERTAD4Q9NUC0 356 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 V9GYH0 126 aa19.71■□□□□ 0.75
USP48-214ENST00000532737 LINC00473A8K010 186 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 CD3DP04234 171 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 MMDQ15546 238 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 ACTBL2Q562R1 376 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 VAX1Q5SQQ9 334 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 C3orf56Q8N813 242 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 OR6F1Q8NGZ6 308 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 SLC35D1Q9NTN3 355 aa19.7■□□□□ 0.74
USP48-214ENST00000532737 GSTZ1O43708 216 aaPredicted RBP19.69■□□□□ 0.74
USP48-214ENST00000532737 APOA2P02652 100 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 IGKV1-16P04430 117 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 HERV-K104P61576 105 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 SSBP1Q04837 148 aaKnown RBP19.69■□□□□ 0.74
USP48-214ENST00000532737 EIF4EBP1Q13541 118 aaPredicted RBP19.69■□□□□ 0.74
USP48-214ENST00000532737 TMEM95Q3KNT9 176 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 C9orf152Q5JTZ5 239 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 TMEM229BQ8NBD8 167 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 BVESQ8NE79 360 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 DDB2Q92466 427 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 MOB3AQ96BX8 217 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 ADTRPQ96IZ2 230 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 ZNF747Q9BV97 191 aa19.69■□□□□ 0.74
USP48-214ENST00000532737 TINAGL1Q9GZM7 467 aaPredicted RBP19.69■□□□□ 0.74
USP48-214ENST00000532737 KRTAP10-3P60369 221 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 TSPAN5P62079 268 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 RPL30P62888 115 aaKnown RBP19.68■□□□□ 0.74
USP48-214ENST00000532737 TMEM17Q86X19 198 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 PDPNQ86YL7 162 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 FAM71E2Q8N5Q1 922 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 WFDC12Q8WWY7 111 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 GPHA2Q96T91 129 aa19.68■□□□□ 0.74
USP48-214ENST00000532737 NBR2O15453 112 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 CD74P04233 296 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 MSMO1Q15800 293 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 ARSJQ5FYB0 599 aaPredicted RBP19.67■□□□□ 0.74
USP48-214ENST00000532737 RNASE10Q5GAN6 216 aaKnown RBP19.67■□□□□ 0.74
USP48-214ENST00000532737 NPBQ8NG41 125 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 RASL11BQ9BPW5 248 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 FXYD6Q9H0Q3 95 aa19.67■□□□□ 0.74
USP48-214ENST00000532737 LIN7CQ9NUP9 197 aaKnown RBP19.67■□□□□ 0.74
USP48-214ENST00000532737 PEX14O75381 377 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 TBPP20226 339 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 GNRHRP30968 328 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 VDAC2P45880 294 aaPredicted RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 TAS2R19P59542 299 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 TAGLNQ01995 201 aaKnown RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 SRSF4Q08170 494 aaKnown RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 ZNF79Q15937 498 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 OR4D10Q8NGI6 311 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 FLYWCH2Q96CP2 140 aaKnown RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 HSD17B10Q99714 261 aaKnown RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 RNF5Q99942 180 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 TAS2R8Q9NYW2 309 aa19.66■□□□□ 0.74
USP48-214ENST00000532737 ZNF107Q9UII5 783 aaPredicted RBP19.66■□□□□ 0.74
USP48-214ENST00000532737 TNFSF12O43508 249 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 NDUFA3O95167 84 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 RAB3DO95716 219 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 ETV6P41212 452 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 RPS16P62249 146 aaKnown RBP19.65■□□□□ 0.74
USP48-214ENST00000532737 PYDC2Q56P42 97 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 STEAP1BQ6NZ63 245 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 ZNF818PQ6ZRF7 136 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 KCTD9Q7L273 389 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 MFSD4AQ8N468 514 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 ZBTB34Q8NCN2 500 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 WNT10AQ9GZT5 417 aa19.65■□□□□ 0.74
USP48-214ENST00000532737 LINC01548A6NM66 108 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 IFNA6P05013 189 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 CSF1P09603 554 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 VSIG10L2P0DP72 767 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 RRASP10301 218 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 PTBP1P26599 531 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP48-214ENST00000532737 RTL8BQ17RB0 113 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 C5orf64Q2M2E5 130 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 CNPY1Q3B7I2 92 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 ZNF66Q6ZN08 573 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 KLHDC1Q8N7A1 406 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 THAP7Q9BT49 309 aaPredicted RBP19.64■□□□□ 0.73
USP48-214ENST00000532737 FBXL15Q9H469 300 aa19.64■□□□□ 0.73
USP48-214ENST00000532737 RRHO14718 337 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms