RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 LINC00482Q8N8I6 264 aa12.13□□□□□ -0.47
CTSB-225ENST00000532409 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
CTSB-225ENST00000532409 FUNDC2Q9BWH2 189 aa12.13□□□□□ -0.47
CTSB-225ENST00000532409 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
CTSB-225ENST00000532409 A3GALT2U3KPV4 340 aa12.13□□□□□ -0.47
CTSB-225ENST00000532409 SCGNO76038 276 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 DIRAS3O95661 229 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 THBS3P49746 956 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 SCAND1P57086 179 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
CTSB-225ENST00000532409 CX3CL1P78423 397 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.12□□□□□ -0.47
CTSB-225ENST00000532409 RAX2Q96IS3 184 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
CTSB-225ENST00000532409 GON7Q9BXV9 100 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 SLC35D1Q9NTN3 355 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 NDUFA13Q9P0J0 144 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
CTSB-225ENST00000532409 SPATA2Q9UM82 520 aa12.12□□□□□ -0.47
CTSB-225ENST00000532409 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 SLC25A17O43808 307 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 RBBP9O75884 186 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 APOA2P02652 100 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 ELANEP08246 267 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 EGR2P11161 476 aaPredicted RBP12.11□□□□□ -0.47
CTSB-225ENST00000532409 PSMB8P28062 276 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
CTSB-225ENST00000532409 PITPNAQ00169 270 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 BVESQ8NE79 360 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 ABHD5Q8WTS1 349 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
CTSB-225ENST00000532409 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 AUNIPQ9H7T9 357 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 ANXA10Q9UJ72 324 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
CTSB-225ENST00000532409 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 LINC00473A8K010 186 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 SOX15O60248 233 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 CA2P00918 260 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 ALDH3B2P48448 385 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 VBP1P61758 197 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
CTSB-225ENST00000532409 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
CTSB-225ENST00000532409 C19orf54Q5BKX5 351 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 FOXB2Q5VYV0 432 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
CTSB-225ENST00000532409 P2RX4Q99571 388 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
CTSB-225ENST00000532409 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
CTSB-225ENST00000532409 ARPC1BO15143 372 aaKnown RBP12.09□□□□□ -0.47
CTSB-225ENST00000532409 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 IGLV2-14P01704 120 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 DUTP33316 252 aaKnown RBP12.09□□□□□ -0.47
CTSB-225ENST00000532409 RAB25P57735 213 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 ZNF660Q6AZW8 331 aaPredicted RBP12.09□□□□□ -0.47
CTSB-225ENST00000532409 SAMD12Q8N8I0 201 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 MYOZ3Q8TDC0 251 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 DDB2Q92466 427 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 GPHA2Q96T91 129 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
CTSB-225ENST00000532409 RNF5Q99942 180 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 OR2W1Q9Y3N9 320 aa12.09□□□□□ -0.47
CTSB-225ENST00000532409 A0A0A6YYH2 397 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 A0A1W2PN81 502 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 A6NJ64 397 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 CCL24O00175 119 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
CTSB-225ENST00000532409 CHRNA7P36544 502 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 MYCNOSP40205 109 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
CTSB-225ENST00000532409 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.48
CTSB-225ENST00000532409 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 UBE2NLQ5JXB2 153 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 CROCCP3Q8IVE0 287 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 GRPEL2Q8TAA5 225 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 HARBI1Q96MB7 349 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
CTSB-225ENST00000532409 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
CTSB-225ENST00000532409 TUSC2O75896 110 aa12.07□□□□□ -0.48
CTSB-225ENST00000532409 SPDEFO95238 335 aa12.07□□□□□ -0.48
CTSB-225ENST00000532409 CRYZL1O95825 349 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms