RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 IGKV1-16P04430 117 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 RRASP10301 218 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 CNTFRP26992 372 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 PPIFP30405 207 aaKnown RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 LGALS7P47929 136 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 THBS3P49746 956 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 LUMP51884 338 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 LINC00205P59089 165 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 SLC35B1P78383 322 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 ZNF660Q6AZW8 331 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 MZT2AQ6P582 158 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 DHRS11Q6UWP2 260 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 GLDNQ6ZMI3 551 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 OVCH2Q7RTZ1 564 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 C1QL4Q86Z23 238 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 ZNF645Q8N7E2 425 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 DRAXINQ8NBI3 349 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 OR4F17Q8NGA8 305 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 OR5AP2Q8NGF4 316 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 GPX8Q8TED1 209 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 GIMAP1Q8WWP7 306 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 RBMXL1Q96E39 390 aaKnown RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 NOL4LQ96MY1 436 aaPredicted RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 OR4F4Q96R69 305 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 TSNAXQ99598 290 aaKnown RBP8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 HSPB9Q9BQS6 159 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 OR51J1Q9H342 316 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 SCPEP1Q9HB40 452 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 KIAA1456Q9P272 454 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 COMMD3Q9UBI1 195 aa8.5□□□□□ -1.05
GPATCH4-216ENST00000531900 IGKV1D-13A0A0B4J2D9 117 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 SMIM31A0A1B0GVY4 71 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 H7C2Y5 167 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 SULT1C2O00338 296 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 IGLV2-23P01705 113 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 IGHG4P01861 327 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 CRYGBP07316 175 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 ELANEP08246 267 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 OR5H8P0DN80 308 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 IGKV1-13P0DP09 117 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 PTHLHP12272 177 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 ELK1P19419 428 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 NFYAP23511 347 aaPredicted RBP8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 PRSS3P35030 304 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 PSG5Q15238 335 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 TEX38Q6PEX7 206 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 ZNF562Q6V9R5 426 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 ZBTB34Q8NCN2 500 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 WFDC9Q8NEX5 89 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 FLYWCH2Q96CP2 140 aaKnown RBP8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 SLC35D1Q9NTN3 355 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 NECAP2Q9NVZ3 263 aa8.49□□□□□ -1.05
GPATCH4-216ENST00000531900 TCRBV4S1A1TA0A5B7 111 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 LINC00473A8K010 186 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 IGLV1-40P01703 118 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 FCGR2CP31995 323 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 ARPC4P59998 168 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 FOXE3Q13461 319 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 DYRK1AQ13627 763 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 SPCS2Q15005 226 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 CDK10Q15131 360 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 ZNF329Q86UD4 541 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 LYSMD2Q8IV50 215 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 MINDY2Q8NBR6 621 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 DYNC2LI1Q8TCX1 351 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 C15orf40Q8WUR7 153 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 HSD17B10Q99714 261 aaKnown RBP8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 FBXL15Q9H469 300 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 RBMX2Q9Y388 322 aaKnown RBP8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 RBM7Q9Y580 266 aaKnown RBP8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 NUBP2Q9Y5Y2 271 aa8.48□□□□□ -1.05
GPATCH4-216ENST00000531900 TGP01266 2768 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 G3V4G9 280 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 FCN1O00602 326 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 HPGDSO60760 199 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 PPYP01298 95 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 PSMB8P28062 276 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 CDX1P47902 265 aaPredicted RBP8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 TAS2R46P59540 309 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 RPS16P62249 146 aaKnown RBP8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 CX3CL1P78423 397 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 RTL8BQ17RB0 113 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 AKIRIN2Q53H80 203 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 HIST2H2BDQ6DRA6 164 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 ZNF66Q6ZN08 573 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 PPP1R27Q86WC6 154 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 TCTEX1D1Q8N7M0 179 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 OSR1Q8TAX0 266 aaPredicted RBP8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 R3HDM4Q96D70 268 aa8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 CCDC59Q9P031 241 aaKnown RBP8.47□□□□□ -1.05
GPATCH4-216ENST00000531900 SCOCQ9UIL1 159 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms