RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PRDX2P32119 198 aa14.05□□□□□ -0.16
VPS26B-206ENST00000531741 HOXA4Q00056 320 aaPredicted RBP14.05□□□□□ -0.16
VPS26B-206ENST00000531741 ZNF343Q6P1L6 599 aa14.05□□□□□ -0.16
VPS26B-206ENST00000531741 BTNL3Q6UXE8 466 aa14.05□□□□□ -0.16
VPS26B-206ENST00000531741 LHX4Q969G2 390 aa14.05□□□□□ -0.16
VPS26B-206ENST00000531741 SLC25A15Q9Y619 301 aa14.05□□□□□ -0.16
VPS26B-206ENST00000531741 PTPRBP23467 1997 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 USF3Q68DE3 2245 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 MBD3L4A6NDZ8 208 aaPredicted RBP14.04□□□□□ -0.16
VPS26B-206ENST00000531741 MBD3L3A6NE82 208 aaPredicted RBP14.04□□□□□ -0.16
VPS26B-206ENST00000531741 MBD3L5A6NJ08 208 aaPredicted RBP14.04□□□□□ -0.16
VPS26B-206ENST00000531741 TGOLN2O43493 480 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 ZG16O60844 167 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 KIAA0141Q14154 515 aaPredicted RBP14.04□□□□□ -0.16
VPS26B-206ENST00000531741 ACSM6Q6P461 480 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 BEND4Q6ZU67 534 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 MBD3L2Q8NHZ7 208 aaPredicted RBP14.04□□□□□ -0.16
VPS26B-206ENST00000531741 CTDSP1Q9GZU7 261 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 JPT1Q9UK76 154 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 FZR1Q9UM11 496 aa14.04□□□□□ -0.16
VPS26B-206ENST00000531741 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 CLDN34H7C241 214 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 TFF1P04155 84 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 CD55P08174 381 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 HOXA5P20719 270 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 B2MP61769 119 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 Q3ZCU0 254 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 WDR25Q64LD2 544 aaPredicted RBP14.03□□□□□ -0.16
VPS26B-206ENST00000531741 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 TMPRSS5Q9H3S3 457 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 PSG11Q9UQ72 335 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
VPS26B-206ENST00000531741 MARCH11A6NNE9 402 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 TMEM250H0YL14 139 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 FGF7P21781 194 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 MEF2BQ02080 365 aaPredicted RBP14.03□□□□□ -0.16
VPS26B-206ENST00000531741 TPRX1Q8N7U7 411 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 PPP1R35Q8TAP8 253 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 SNX22Q96L94 193 aa14.03□□□□□ -0.16
VPS26B-206ENST00000531741 OPN3Q9H1Y3 402 aaPredicted RBP14.03□□□□□ -0.16
VPS26B-206ENST00000531741 CELSR3Q9NYQ7 3312 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 MGST3O14880 152 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 ATXN7O15265 892 aaPredicted RBP14.02□□□□□ -0.16
VPS26B-206ENST00000531741 ST8SIA5O15466 376 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 YPEL1O60688 119 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 CLN5O75503 358 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 DUTP33316 252 aaKnown RBP14.02□□□□□ -0.16
VPS26B-206ENST00000531741 CD81P60033 236 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 C3orf36Q3SXR2 165 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 NANPQ8TBE9 248 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 YPEL2Q96QA6 119 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 NPCDR1Q9BY65 106 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 MANBALQ9NQG1 85 aa14.02□□□□□ -0.16
VPS26B-206ENST00000531741 BDP1A6H8Y1 2624 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 IGKV1D-17A0A075B6S4 117 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 TGIF2-C20orf24A0A0A6YYL0 155 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 IGHV3-43A0A0B4J1X8 118 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 RBFOX2O43251 390 aaKnown RBP eCLIP14.02□□□□□ -0.17
VPS26B-206ENST00000531741 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.17
VPS26B-206ENST00000531741 SOX15O60248 233 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 IGHV3-43DP0DP04 118 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 ZNF674Q2M3X9 581 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 CYP2G1PQ6ZSU1 146 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 SLC16A13Q7RTY0 426 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 C1orf87Q8N0U7 546 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 OR2Z1Q8NG97 314 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 RFESDQ8TAC1 157 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 R3HDM4Q96D70 268 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 ACTR3CQ9C0K3 210 aaPredicted RBP14.02□□□□□ -0.17
VPS26B-206ENST00000531741 NCOR1P1Q9H4R4 102 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 NAT8Q9UHE5 227 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 URGCP-MRPS24S4R325 110 aa14.02□□□□□ -0.17
VPS26B-206ENST00000531741 SPAARA0A1B0GVQ0 90 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 HPRT1P00492 218 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 EGR1P18146 543 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 GPR12P47775 334 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
VPS26B-206ENST00000531741 PSMB3P49720 205 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 MORN2Q502X0 79 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 PDLIM3Q53GG5 364 aaPredicted RBP14.01□□□□□ -0.17
VPS26B-206ENST00000531741 SEM1Q6ZVN7 128 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 OR10G9Q8NGN4 311 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 OR10G7Q8NGN6 311 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 DIRC2Q96SL1 478 aa14.01□□□□□ -0.17
VPS26B-206ENST00000531741 TRBV24-1A0A075B6N3 115 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 C17orf112F2Z3M2 114 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 F2RL2O00254 374 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 IGHV3-13P01766 116 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 OPN1MWP04001 364 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 OPN1MW2P0DN77 364 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 OPN1MW3P0DN78 364 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 FFAR4Q5NUL3 377 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 NCR3LG1Q68D85 454 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 ZNF709Q8N972 641 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 OR52E5Q8NH55 327 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 DCTN5Q9BTE1 182 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 PARD6AQ9NPB6 346 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 C15orf62A8K5M9 175 aa14□□□□□ -0.17
VPS26B-206ENST00000531741 DEFB108AA8MXU0 73 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms