RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CLDN24A6NM45 220 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 C15orf65H3BRN8 121 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 IGHMP01871 453 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 CAPZBP47756 277 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 FOXA1P55317 472 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 OR4D2P58180 307 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 BTN3A2P78410 334 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 IFITM2Q01629 132 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 PRDX4Q13162 271 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 DHRS2Q13268 280 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 SPIN3Q5JUX0 258 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 C1orf194Q5T5A4 169 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 SBSNQ6UWP8 590 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 CLDN22Q8N7P3 220 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 SLC35B4Q969S0 331 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 C1QTNF6Q9BXI9 259 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 PECRQ9BY49 303 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
USP47-211ENST00000531513 FKBP14Q9NWM8 211 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 TAS2R1Q9NYW7 299 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 VPS29Q9UBQ0 182 aa2.45□□□□□ -2.02
USP47-211ENST00000531513 CRB1P82279 1406 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 OR5G3P0C626 314 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 CCL1P22362 96 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 ATP6V0CP27449 155 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 CRABP1P29762 137 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 MAP2K4P45985 399 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 SERPINB9P50453 376 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 RPS11P62280 158 aaKnown RBP eCLIP2.44□□□□□ -2.02
USP47-211ENST00000531513 GUK1Q16774 197 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 LGALSLQ3ZCW2 172 aaPredicted RBP2.44□□□□□ -2.02
USP47-211ENST00000531513 MRPL51Q4U2R6 128 aaKnown RBP2.44□□□□□ -2.02
USP47-211ENST00000531513 HIST2H3PS2Q5TEC6 136 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 C5orf46Q6UWT4 87 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 CCDC121Q6ZUS5 278 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 HIST2H3AQ71DI3 136 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 LRRC25Q8N386 305 aaPredicted RBP2.44□□□□□ -2.02
USP47-211ENST00000531513 DEFB125Q8N687 156 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 LY6G5BQ8NDX9 201 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 OR51D1Q8NGF3 324 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 CPNE2Q96FN4 548 aaPredicted RBP2.44□□□□□ -2.02
USP47-211ENST00000531513 DUSP21Q9H596 190 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 HHLA2Q9UM44 414 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 ARL2BPQ9Y2Y0 163 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 V9GYQ6 96 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 FLT4P35916 1363 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 ATAD5Q96QE3 1844 aa2.44□□□□□ -2.02
USP47-211ENST00000531513 A8MWP6 167 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 CHP2O43745 196 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 FADS1O60427 444 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 APOMO95445 188 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 ZNF14P17017 642 aaPredicted RBP2.43□□□□□ -2.02
USP47-211ENST00000531513 CDK9P50750 372 aaKnown RBP2.43□□□□□ -2.02
USP47-211ENST00000531513 RAB14P61106 215 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 FLI1Q01543 452 aaPredicted RBP2.43□□□□□ -2.02
USP47-211ENST00000531513 IL15RAQ13261 267 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 ALKAL1Q6UXT8 129 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 EIF4E3Q8N5X7 224 aaKnown RBP2.43□□□□□ -2.02
USP47-211ENST00000531513 C1orf64Q8NEQ6 169 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 OR2D3Q8NGH3 330 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 OR1L8Q8NGR8 309 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 OR2T27Q8NH04 317 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 SLC25A44Q96H78 314 aaPredicted RBP2.43□□□□□ -2.02
USP47-211ENST00000531513 UPK3BQ9BT76 320 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 TLNRD1Q9H1K6 362 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 ANAPC10Q9UM13 185 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 ARL5AQ9Y689 179 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 PXMP4Q9Y6I8 212 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 ADAMTSL1Q8N6G6 1762 aa2.43□□□□□ -2.02
USP47-211ENST00000531513 SPATA31E1Q6ZUB1 1445 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 THADAQ6YHU6 1953 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 KIF26AQ9ULI4 1882 aaPredicted RBP2.42□□□□□ -2.02
USP47-211ENST00000531513 ADGRL1O94910 1474 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 SMIM9A6NGZ8 99 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 GGTLC3B5MD39 225 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 HLA-DQB2P05538 268 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 IGHV3-30-3P0DP02 117 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 MAGEA12P43365 314 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 TAS2R45P59539 299 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 HOXC5Q00444 222 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 SLC9A3R2Q15599 337 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 FAM201AQ5SY85 155 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 PRR9Q5T870 116 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 SCXQ7RTU7 201 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 Q8NAQ8 132 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 R4GN34 69 aa2.42□□□□□ -2.02
USP47-211ENST00000531513 NAV1Q8NEY1 1877 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 NUP205Q92621 2012 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 A0A1B0GU33 70 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 A0A1B0GV50 99 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 IGSF23A1L1A6 192 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 OR4C45A6NMZ5 311 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 EEF1E1-BLOC1S5C9J1V9 151 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 CRYGDP07320 174 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 CD79AP11912 226 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 MSNP26038 577 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms