RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 NDPQ00604 133 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 SPCS2Q15005 226 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 BVESQ8NE79 360 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 DDB2Q92466 427 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 RNF5Q99942 180 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 OR51J1Q9H342 316 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 SLC35D1Q9NTN3 355 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
RELA-216ENST00000531238 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 PLXNB1O43157 2135 aa12.73□□□□□ -0.37
RELA-216ENST00000531238 RBBP9O75884 186 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 CRYGBP07316 175 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 PPIFP30405 207 aaKnown RBP12.72□□□□□ -0.37
RELA-216ENST00000531238 LUMP51884 338 aaPredicted RBP12.72□□□□□ -0.37
RELA-216ENST00000531238 RPS16P62249 146 aaKnown RBP12.72□□□□□ -0.37
RELA-216ENST00000531238 RPL30P62888 115 aaKnown RBP12.72□□□□□ -0.37
RELA-216ENST00000531238 CX3CL1P78423 397 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 EIF4EBP1Q13541 118 aaPredicted RBP12.72□□□□□ -0.37
RELA-216ENST00000531238 TMEM69Q5SWH9 247 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 PDPNQ86YL7 162 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 CLCC1Q96S66 551 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 KIAA1456Q9P272 454 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 ANAPC10Q9UM13 185 aa12.72□□□□□ -0.37
RELA-216ENST00000531238 ATP6V0E1O15342 81 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 APOA1P02647 267 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 RPLP1P05386 114 aaKnown RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 AADACP22760 399 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 FCGR2CP31995 323 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 RPL23AP62750 156 aaKnown RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 SSBP2P81877 361 aaPredicted RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 MRGPRG-AS1Q2M3A8 158 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 OR4F17Q8NGA8 305 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 ACOT12Q8WYK0 555 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 FLYWCH2Q96CP2 140 aaKnown RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 CMTM3Q96MX0 182 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
RELA-216ENST00000531238 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.37
RELA-216ENST00000531238 G3V4G9 280 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 IGHG4P01861 327 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 APOA2P02652 100 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 ZNF182P17025 639 aaPredicted RBP12.7□□□□□ -0.38
RELA-216ENST00000531238 NAT1P18440 290 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 CBX5P45973 191 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 THBS3P49746 956 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 SLC35B1P78383 322 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 PJVKQ0ZLH3 352 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 TMEM177Q53S58 311 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 C19orf54Q5BKX5 351 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 WFDC9Q8NEX5 89 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 PARP11Q9NR21 331 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 MRPS7Q9Y2R9 242 aaKnown RBP12.7□□□□□ -0.38
RELA-216ENST00000531238 NUBP2Q9Y5Y2 271 aa12.7□□□□□ -0.38
RELA-216ENST00000531238 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
RELA-216ENST00000531238 SLC25A17O43808 307 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 OR5H8P0DN80 308 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 PRSS3P35030 304 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 RFX2P48378 723 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 ARPC4P59998 168 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 ZNF660Q6AZW8 331 aaPredicted RBP12.69□□□□□ -0.38
RELA-216ENST00000531238 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 COMMD1Q8N668 190 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 MINDY2Q8NBR6 621 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 GPX8Q8TED1 209 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
RELA-216ENST00000531238 RBMX2Q9Y388 322 aaKnown RBP12.69□□□□□ -0.38
RELA-216ENST00000531238 SOX15O60248 233 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 CA2P00918 260 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 VDAC1P21796 283 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 PSMB8P28062 276 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
RELA-216ENST00000531238 DEFA6Q01524 100 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 FOXE3Q13461 319 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 CDK10Q15131 360 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 PLGLAQ15195 96 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 ZNF562Q6V9R5 426 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 C8orf86Q6ZUL3 223 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 GIMAP1Q8WWP7 306 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 TSNAXQ99598 290 aaKnown RBP12.68□□□□□ -0.38
RELA-216ENST00000531238 FAM103A1Q9BTL3 118 aaKnown RBP12.68□□□□□ -0.38
RELA-216ENST00000531238 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
RELA-216ENST00000531238 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms