RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
CCS-205ENST00000530384 LINC00205P59089 165 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 ARPC4P59998 168 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 CFHR3Q02985 330 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 ZNF660Q6AZW8 331 aaPredicted RBP13.4□□□□□ -0.26
CCS-205ENST00000530384 HOGA1Q86XE5 327 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 ANKRD13BQ86YJ7 626 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 RNF152Q8N8N0 203 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 PARP11Q9NR21 331 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
CCS-205ENST00000530384 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 RRASP10301 218 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 CD33P20138 364 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
CCS-205ENST00000530384 LGALS7P47929 136 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 PSG5Q15238 335 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 RTL8BQ17RB0 113 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 ZNF645Q8N7E2 425 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 WFDC9Q8NEX5 89 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 C5orf30Q96GV9 206 aa13.39□□□□□ -0.27
CCS-205ENST00000530384 METTL1Q9UBP6 276 aaKnown RBP13.39□□□□□ -0.27
CCS-205ENST00000530384 NOTCH1P46531 2555 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 GABARAPO95166 117 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 RPLP1P05386 114 aaKnown RBP13.38□□□□□ -0.27
CCS-205ENST00000530384 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
CCS-205ENST00000530384 CX3CL1P78423 397 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 TMEM69Q5SWH9 247 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 GVQW1Q8N7I0 195 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 KLHL30-AS1Q8NEE0 82 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 ACOT12Q8WYK0 555 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 CMTM3Q96MX0 182 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 WSB1Q9Y6I7 421 aa13.38□□□□□ -0.27
CCS-205ENST00000530384 G3V4G9 280 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 J3QRK9 145 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 TUSC2O75896 110 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 PSMB8P28062 276 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
CCS-205ENST00000530384 CDX1P47902 265 aaPredicted RBP13.37□□□□□ -0.27
CCS-205ENST00000530384 RORCP51449 518 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
CCS-205ENST00000530384 TMEM177Q53S58 311 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 ZNF562Q6V9R5 426 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 TCTEX1D1Q8N7M0 179 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 BVESQ8NE79 360 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 HARBI1Q96MB7 349 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
CCS-205ENST00000530384 G3V318 75 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 FCN1O00602 326 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 SLC25A17O43808 307 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 PTHLHP12272 177 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 MYCNOSP40205 109 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 TAS2R20P59543 309 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 NDPQ00604 133 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
CCS-205ENST00000530384 CTF1Q16619 201 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 GPR107Q5VW38 600 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 GPR141Q7Z602 305 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 ABHD5Q8WTS1 349 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 DDB2Q92466 427 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 CLCC1Q96S66 551 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 NAA50Q9GZZ1 169 aaKnown RBP13.36□□□□□ -0.27
CCS-205ENST00000530384 IFT46Q9NQC8 304 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
CCS-205ENST00000530384 RBMX2Q9Y388 322 aaKnown RBP13.36□□□□□ -0.27
CCS-205ENST00000530384 IGKV1D-13A0A0B4J2D9 117 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 SMIM31A0A1B0GVY4 71 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 LINC00473A8K010 186 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 SHOXO15266 292 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 CA2P00918 260 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 IGLV2-23P01705 113 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 APOA1P02647 267 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 IGKV1-13P0DP09 117 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 ALDH3B2P48448 385 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 BEAN1Q3B7T3 259 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
CCS-205ENST00000530384 ETV3LQ6ZN32 361 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 LCNL1Q6ZST4 164 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 C18orf65Q6ZTR6 163 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 PPP1R27Q86WC6 154 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 MINDY2Q8NBR6 621 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 AP3S1Q92572 193 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
CCS-205ENST00000530384 PRELID3BQ9Y3B1 194 aa13.35□□□□□ -0.27
CCS-205ENST00000530384 DUS4LO95620 317 aaKnown RBP13.34□□□□□ -0.27
CCS-205ENST00000530384 IGLV1-40P01703 118 aa13.34□□□□□ -0.27
CCS-205ENST00000530384 EIF4EP06730 217 aaKnown RBP13.34□□□□□ -0.27
CCS-205ENST00000530384 FCGR2CP31995 323 aa13.34□□□□□ -0.27
CCS-205ENST00000530384 PRSS3P35030 304 aa13.34□□□□□ -0.27
CCS-205ENST00000530384 MSMO1Q15800 293 aa13.34□□□□□ -0.27
CCS-205ENST00000530384 OXLD1Q5BKU9 147 aa13.34□□□□□ -0.27
CCS-205ENST00000530384 C19orf54Q5BKX5 351 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms