RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 TRBV9A0A0B4J1U6 114 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 MPPED1O15442 326 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ACTL6BO94805 426 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 DHFRP00374 187 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 TRBV12-3P01733 135 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 UBBP0CG47 229 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 MYOD1P15172 320 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 MGMTP16455 207 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 GALP22466 123 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 CBLN1P23435 193 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ZBTB25P24278 435 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 SERPINB10P48595 397 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 GYS2P54840 703 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ELLP55199 621 aaPredicted RBP4.18□□□□□ -1.74
CTSB-216ENST00000530290 RHOGP84095 191 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ATP5G2Q06055 141 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 TPBGQ13641 420 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 RBMS2Q15434 407 aaKnown RBP4.18□□□□□ -1.74
CTSB-216ENST00000530290 RTL8BQ17RB0 113 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 FAM106AQ4KMX7 169 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 TMEM177Q53S58 311 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 AWAT2Q6E213 333 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 RPL22L1Q6P5R6 122 aaKnown RBP4.18□□□□□ -1.74
CTSB-216ENST00000530290 TMEM61Q8N0U2 210 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 SVOPQ8N4V2 548 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 OR5T1Q8NG75 326 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 OR1L6Q8NGR2 347 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 FAM46BQ96A09 425 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 WDR89Q96FK6 387 aaPredicted RBP4.18□□□□□ -1.74
CTSB-216ENST00000530290 HARBI1Q96MB7 349 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 Q96MT0 163 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 NEDD4LQ96PU5 975 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 CLCC1Q96S66 551 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 CIB1Q99828 191 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 UQCC2Q9BRT2 126 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 AGMATQ9BSE5 352 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 SLC35D1Q9NTN3 355 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ZNF581Q9P0T4 197 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ZNF221Q9UK13 617 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ZNF257Q9Y2Q1 563 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 ORC6Q9Y5N6 252 aa4.18□□□□□ -1.74
CTSB-216ENST00000530290 TRBV6-6A0A0A6YYG2 114 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 A0A1W2PP11 408 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 IRGMA1A4Y4 181 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 TMEM213A2RRL7 107 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 H3BNX3 289 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 DIRAS3O95661 229 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 NAPSAO96009 420 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 IGKV1-16P04430 117 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 CRYGBP07316 175 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 SCTP09683 121 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 T-ENOLP0DO92 83 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 IGFBP3P17936 291 aaPredicted RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 ADMP35318 185 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 RANBP1P43487 201 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 SOX2P48431 317 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 CMC4P56277 68 aaPredicted RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 SSBP2P81877 361 aaPredicted RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 VMA21Q3ZAQ7 101 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 TM4SF20Q53R12 229 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 RPL39P5Q59GN2 51 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 YIF1BQ5BJH7 314 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 TTC23Q5W5X9 447 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 ZNF880Q6PDB4 577 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 GLIPR1L1Q6UWM5 242 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 RBPMS2Q6ZRY4 209 aaKnown RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 NR2C2APQ86WQ0 139 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 JAGN1Q8N5M9 183 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 OR2C3Q8N628 320 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 KCNG3Q8TAE7 436 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 IL1F10Q8WWZ1 152 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 SRSF12Q8WXF0 261 aaKnown RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 SMIM19Q96E16 107 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 GALNT14Q96FL9 552 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 ADTRPQ96IZ2 230 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 THTPAQ9BU02 230 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 CENPOQ9BU64 300 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 SELENOIQ9C0D9 397 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 HRH4Q9H3N8 390 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 AKIP1Q9NQ31 210 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 ERVK13-1Q9NX77 482 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 PLA2G2EQ9NZK7 142 aa4.17□□□□□ -1.74
CTSB-216ENST00000530290 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
CTSB-216ENST00000530290 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 UBE2QL1A1L167 161 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 OR4C46A6NHA9 309 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 TSPAN4O14817 238 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 SHOXO15266 292 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
CTSB-216ENST00000530290 IGLV2-23P01705 113 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 HIST1H1BP16401 226 aaKnown RBP4.16□□□□□ -1.74
CTSB-216ENST00000530290 MAPK3P27361 379 aaPredicted RBP4.16□□□□□ -1.74
CTSB-216ENST00000530290 PSMB6P28072 239 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 UBE2KP61086 200 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 HLA-DRB3P79483 266 aa4.16□□□□□ -1.74
CTSB-216ENST00000530290 EWSR1Q01844 656 aaKnown RBP eCLIP4.16□□□□□ -1.74
CTSB-216ENST00000530290 MED21Q13503 144 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms