RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ABCB9Q9NP78 766 aa4.8□□□□□ -1.64
SVIP-204ENST00000530199 CLEC5AQ9NY25 188 aa4.8□□□□□ -1.64
SVIP-204ENST00000530199 POLR1DQ9Y2S0 133 aa4.8□□□□□ -1.64
SVIP-204ENST00000530199 RRP15Q9Y3B9 282 aaKnown RBP4.8□□□□□ -1.64
SVIP-204ENST00000530199 MPC1Q9Y5U8 109 aa4.8□□□□□ -1.64
SVIP-204ENST00000530199 METTL21EPA6NDL7 271 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 CPSF4LA6NMK7 179 aaKnown RBP4.79□□□□□ -1.64
SVIP-204ENST00000530199 FAM220BPB1ANY3 271 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 C5orf58C9J3I9 102 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 RFXANKO14593 260 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 SLC16A7O60669 478 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 MMP23AO75900 390 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 IGKV1D-33P01593 117 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 IGKV1-33P01594 117 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 ZNF44P15621 663 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 AQP1P29972 269 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 EDDM3BP56851 147 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 FADDQ13158 208 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 RGNQ15493 299 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 SMIM21Q3B7S5 101 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 CCDC153Q494R4 210 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 MESTQ5EB52 335 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 OR6V1Q8N148 313 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 FTMTQ8N4E7 242 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 OR2T33Q8NG76 320 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 OR9G4Q8NGQ1 327 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 PFN4Q8NHR9 129 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 OR52E6Q96RD3 313 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 HSPB9Q9BQS6 159 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 FGF23Q9GZV9 251 aaPredicted RBP4.79□□□□□ -1.64
SVIP-204ENST00000530199 PIPOXQ9P0Z9 390 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 ZNF221Q9UK13 617 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 RPH3ALQ9UNE2 315 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 RHBDD3Q9Y3P4 386 aa4.79□□□□□ -1.64
SVIP-204ENST00000530199 FAM183AA6NL82 134 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 NCBP2LA6PVI3 153 aaKnown RBP4.78□□□□□ -1.64
SVIP-204ENST00000530199 XKRYO14609 159 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PLIN3O60664 434 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 ZNF737O75373 536 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
SVIP-204ENST00000530199 TCP1P17987 556 aaKnown RBP4.78□□□□□ -1.64
SVIP-204ENST00000530199 ZP3P21754 424 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PTBP1P26599 531 aaKnown RBP eCLIP4.78□□□□□ -1.64
SVIP-204ENST00000530199 KIR2DS2P43631 304 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PRRX1P54821 245 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 ST3GAL3Q11203 375 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 APOFQ13790 326 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 LAGE3Q14657 143 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 SLC22A6Q4U2R8 563 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 REEP3Q6NUK4 255 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 HEPN1Q6WQI6 88 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 FAM122BQ7Z309 247 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 C4orf33Q8N1A6 199 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 C15orf54Q8N8G6 183 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 UBALD1Q8TB05 177 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PIGCQ92535 297 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 RPEQ96AT9 228 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PELI1Q96FA3 418 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 SYT4Q9H2B2 425 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 OR51I2Q9H344 312 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 C11orf68Q9H3H3 251 aaKnown RBP4.78□□□□□ -1.64
SVIP-204ENST00000530199 ZNF286AQ9HBT8 521 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PLSCR3Q9NRY6 295 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 CYB5R1Q9UHQ9 305 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 PIGLQ9Y2B2 252 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 MUC2Q02817 5179 aa4.78□□□□□ -1.64
SVIP-204ENST00000530199 H3BMQ9 156 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 TOR1AO14656 332 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 NOS1APO75052 506 aaPredicted RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 SERPINB7O75635 380 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 CST4P01036 141 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 H2BFMP0C1H6 154 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 PRB4P10163 310 aaPredicted RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 CTRB1P17538 263 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 CFL1P23528 166 aaKnown RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 RAB7AP51149 207 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 MRPS25P82663 173 aaKnown RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 TIGITQ495A1 244 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 KLHL12Q53G59 568 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 CTRB2Q6GPI1 263 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 GDPD3Q7L5L3 318 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 OR10A7Q8NGE5 316 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 TMEM239Q8WW34 195 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 TRUB1Q8WWH5 349 aaKnown RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 AQP3Q92482 292 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 RNF170Q96K19 258 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 Q96M85 177 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 RASL11BQ9BPW5 248 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 AGRNO00468 2067 aa4.77□□□□□ -1.65
SVIP-204ENST00000530199 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
SVIP-204ENST00000530199 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
SVIP-204ENST00000530199 A0A1B0GU03 582 aa4.76□□□□□ -1.65
SVIP-204ENST00000530199 E9PLD3 99 aa4.76□□□□□ -1.65
SVIP-204ENST00000530199 G3V318 75 aa4.76□□□□□ -1.65
SVIP-204ENST00000530199 CD14P08571 375 aa4.76□□□□□ -1.65
SVIP-204ENST00000530199 TROVE2P10155 538 aaKnown RBP eCLIP4.76□□□□□ -1.65
SVIP-204ENST00000530199 BCL3P20749 454 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms