RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
CCDC90B-215ENST00000529745 C5orf30Q96GV9 206 aa12.09□□□□□ -0.47
CCDC90B-215ENST00000529745 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-215ENST00000529745 GINS4Q9BRT9 223 aa12.09□□□□□ -0.47
CCDC90B-215ENST00000529745 M0R1X1 148 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 GNG2P59768 71 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 NDPQ00604 133 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 PSG5Q15238 335 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 C18orf65Q6ZTR6 163 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 C8orf86Q6ZUL3 223 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 SLC35D1Q9NTN3 355 aa12.08□□□□□ -0.48
CCDC90B-215ENST00000529745 TRAV41A0A0B4J266 112 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 SLC22A5O76082 557 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 RRASP10301 218 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 RPS19P39019 145 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 LGALS7P47929 136 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 LINC00205P59089 165 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 CX3CL1P78423 397 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 ZNF562Q6V9R5 426 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 DNAH3Q8TD57 4116 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 DDB2Q92466 427 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 FLYWCH2Q96CP2 140 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 PARP11Q9NR21 331 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 DIABLOQ9NR28 239 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 NOTCH3Q9UM47 2321 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 FBXO7Q9Y3I1 522 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 NUBP2Q9Y5Y2 271 aa12.07□□□□□ -0.48
CCDC90B-215ENST00000529745 NUDT19A8MXV4 375 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 TUSC2O75896 110 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 CRYGBP07316 175 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 EGR2P11161 476 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 IGLL1P15814 213 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 TGFBR1P36897 503 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 RUNX1Q01196 453 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 ZNF645Q8N7E2 425 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 OR13F1Q8NGS4 319 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 C4orf3Q8WVX3 66 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 AUNIPQ9H7T9 357 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 NECAP2Q9NVZ3 263 aa12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-215ENST00000529745 TRAV18A0A075B6X5 111 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 G3V318 75 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 FCN1O00602 326 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 XRCC3O43542 346 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 IGLV2-23P01705 113 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 FHL3Q13643 280 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 PLGLAQ15195 96 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 AKIRIN2Q53H80 203 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 FOXB2Q5VYV0 432 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 HOGA1Q86XE5 327 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 ZNF491Q8N8L2 437 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 SLC25A46Q96AG3 418 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 RAX2Q96IS3 184 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 MCRIP2Q9BUT9 160 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 FUNDC2Q9BWH2 189 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 RBM7Q9Y580 266 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
CCDC90B-215ENST00000529745 CCL24O00175 119 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 CBX5P45973 191 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 CBX3Q13185 183 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 MSMO1Q15800 293 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 RTL8BQ17RB0 113 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 PYHIN1Q6K0P9 492 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 PPP1R27Q86WC6 154 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 CMTM3Q96MX0 182 aa12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 FOXA2Q9Y261 457 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-215ENST00000529745 LINC00473A8K010 186 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 I3L521 148 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 SOX15O60248 233 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 CA2P00918 260 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 IGLV2-14P01704 120 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 SMIM18P0DKX4 95 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 RAB9AP51151 201 aa12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-215ENST00000529745 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms