RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 PSG5Q15238 335 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 NSUN5P1Q3KNT7 163 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 LYSMD2Q8IV50 215 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 FOXRED2Q8IWF2 684 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 DYNC2LI1Q8TCX1 351 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 GPX8Q8TED1 209 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 RBM7Q9Y580 266 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 SMIM31A0A1B0GVY4 71 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 OR5H8P0DN80 308 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 AADACP22760 399 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 FCGR2CP31995 323 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 THBS3P49746 956 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 FAM110DQ8TAY7 271 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 GIMAP1Q8WWP7 306 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 NECAP2Q9NVZ3 263 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 CEPT1Q9Y6K0 416 aa12.67□□□□□ -0.38
TSPAN4-218ENST00000529566 TCRBV4S1A1TA0A5B7 111 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 H3BMQ9 156 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 SLC22A5O76082 557 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 APOA2P02652 100 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 CRYGBP07316 175 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 RPS16P62249 146 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 CDK10Q15131 360 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 ZNF660Q6AZW8 331 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 OVCH2Q7RTZ1 564 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 BVESQ8NE79 360 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 ISOC1Q96CN7 298 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 ADTRPQ96IZ2 230 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 IFT46Q9NQC8 304 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 ADAM30Q9UKF2 790 aa12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 RBMX2Q9Y388 322 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-218ENST00000529566 CTDSP2O14595 271 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 SPDEFO95238 335 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 PPYP01298 95 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 OPN1MWP04001 364 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 OPN1MW2P0DN77 364 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 OPN1MW3P0DN78 364 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 EGR2P11161 476 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 RFX2P48378 723 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 CX3CL1P78423 397 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 NDPQ00604 133 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 C19orf54Q5BKX5 351 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 SNX29P2Q8IUI4 249 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 RNF152Q8N8N0 203 aa12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 TSNAXQ99598 290 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-218ENST00000529566 A0A1W2PRX2 142 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 FAM25AB3EWG3 89 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 FAM25CB3EWG5 89 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 FAM25GB3EWG6 89 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 TPPPO94811 219 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 IGHG4P01861 327 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 RRASP10301 218 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 LGALS7P47929 136 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 SLC35B1P78383 322 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 DYRK1AQ13627 763 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 MSMO1Q15800 293 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 MRGPRG-AS1Q2M3A8 158 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 ABHD1Q96SE0 405 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 TPSG1Q9NRR2 321 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 METTL1Q9UBP6 276 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
TSPAN4-218ENST00000529566 G3V318 75 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 SULT1C2O00338 296 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 SLC25A17O43808 307 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 PMP2P02689 132 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 SSBP2P81877 361 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 FOXE3Q13461 319 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 RTL8BQ17RB0 113 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 ZNF562Q6V9R5 426 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms