RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
USF1-209ENST00000529476 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 SLC22A5O76082 557 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 MOSP00540 346 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 DUTP33316 252 aaKnown RBP11.19□□□□□ -0.62
USF1-209ENST00000529476 KLF9Q13886 244 aaPredicted RBP11.19□□□□□ -0.62
USF1-209ENST00000529476 MEF2DQ14814 521 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 AADACL3Q5VUY0 350 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 ZNF818PQ6ZRF7 136 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 TOMM5Q8N4H5 51 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 RBM14Q96PK6 669 aaKnown RBP11.19□□□□□ -0.62
USF1-209ENST00000529476 GPHA2Q96T91 129 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
USF1-209ENST00000529476 LINC00473A8K010 186 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 H7C2Y5 167 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 TNFSF12O43508 249 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 OR2F2O95006 317 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 CRYBA1P05813 215 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 GNRHRP30968 328 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 MC5RP33032 325 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 THBS3P49746 956 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
USF1-209ENST00000529476 EIF4EBP1Q13541 118 aaPredicted RBP11.18□□□□□ -0.62
USF1-209ENST00000529476 MSMO1Q15800 293 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 SCGB2B2Q4G0G5 96 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
USF1-209ENST00000529476 LHFPL1Q86WI0 220 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 Q8N6K4 173 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 S100ZQ8WXG8 99 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 RITA1Q96K30 269 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 RAB18Q9NP72 206 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 C1RLQ9NZP8 487 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
USF1-209ENST00000529476 DISC1C4P0D8 188 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 APOA2P02652 100 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 PPP5CP53041 499 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 AP3S2P59780 193 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
USF1-209ENST00000529476 RELBQ01201 579 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 TRIQKQ629K1 86 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
USF1-209ENST00000529476 KCTD9Q7L273 389 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 C16orf82Q7Z2V1 217 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 BVESQ8NE79 360 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 TERB2Q8NHR7 220 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 DDB2Q92466 427 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 MRGPRFQ96AM1 343 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 ADTRPQ96IZ2 230 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 HSD17B10Q99714 261 aaKnown RBP11.17□□□□□ -0.62
USF1-209ENST00000529476 HRASLSQ9HDD0 168 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 SLC35D1Q9NTN3 355 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 MCUBQ9NWR8 336 aa11.17□□□□□ -0.62
USF1-209ENST00000529476 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 IL7P13232 177 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 PGAM2P15259 253 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 CNTFRP26992 372 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 INPP1P49441 399 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 F2RL1P55085 397 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 UCP3P55916 312 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 OR2B11Q5JQS5 317 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 ZBTB34Q8NCN2 500 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 OR51S1Q8NGJ8 323 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 RSRP1Q9BUV0 290 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 PLSCR3Q9NRY6 295 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
USF1-209ENST00000529476 LINC00854A0A1B0GVQ3 168 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
USF1-209ENST00000529476 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
USF1-209ENST00000529476 GPR31O00270 319 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 PEX14O75381 377 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 AMY1AP04745 511 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 HKR1P10072 659 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
USF1-209ENST00000529476 BLCAPP62952 87 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 ZNF846Q147U1 533 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 MMDQ15546 238 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 PHLDA2Q53GA4 152 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 LPCAT3Q6P1A2 487 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 Q6ZS46 218 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 Q6ZSV7 163 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 MARCH1Q8TCQ1 289 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 PRRT1Q99946 306 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
USF1-209ENST00000529476 FCGR3BO75015 233 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 PGLYRP1O75594 196 aaPredicted RBP11.14□□□□□ -0.63
USF1-209ENST00000529476 NDUFA7O95182 113 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 RLN1P04808 185 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 RRASP10301 218 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 PI3P19957 117 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms