RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DCSTAMPQ9H295 470 aa7.53□□□□□ -1.2
CHD7-208ENST00000528280 OR1A1Q9P1Q5 309 aa7.53□□□□□ -1.2
CHD7-208ENST00000528280 KCNK7Q9Y2U2 307 aa7.53□□□□□ -1.2
CHD7-208ENST00000528280 RBM7Q9Y580 266 aaKnown RBP7.53□□□□□ -1.2
CHD7-208ENST00000528280 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
CHD7-208ENST00000528280 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 MFNGO00587 321 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 ARPC1BO15143 372 aaKnown RBP7.52□□□□□ -1.21
CHD7-208ENST00000528280 BET1O15155 118 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 RAMP3O60896 148 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 RPLP1P05386 114 aaKnown RBP7.52□□□□□ -1.21
CHD7-208ENST00000528280 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
CHD7-208ENST00000528280 RAB9AP51151 201 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
CHD7-208ENST00000528280 ZNF846Q147U1 533 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 CTF1Q16619 201 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 TIMM50Q3ZCQ8 353 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 CDNFQ49AH0 187 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 AKIRIN2Q53H80 203 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 Q6ZPA2 131 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 LCNL1Q6ZST4 164 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 OR5M8Q8NGP6 311 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 ADTRPQ96IZ2 230 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 RITA1Q96K30 269 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 CABLES2Q9BTV7 478 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 NAA50Q9GZZ1 169 aaKnown RBP7.52□□□□□ -1.21
CHD7-208ENST00000528280 PARP11Q9NR21 331 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 VSIG4Q9Y279 399 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 WSB1Q9Y6I7 421 aa7.52□□□□□ -1.21
CHD7-208ENST00000528280 COL7A1Q02388 2944 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 A0A075B6Q4 140 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 A0A0A6YYH2 397 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 IGKV1-6A0A0C4DH72 117 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 SHISA3A0PJX4 238 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 A6NJ64 397 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 M0R1X1 148 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 OR8U9P0C7N5 309 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 ZNF182P17025 639 aaPredicted RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 CX3CL1P78423 397 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 RUNX1Q01196 453 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 EGFEM1PQ0D2K5 195 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 PSG5Q15238 335 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 RTL8BQ17RB0 113 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 MOGAT2Q3SYC2 334 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 HACD4Q5VWC8 232 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 ETV3LQ6ZN32 361 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 Q6ZNX1 250 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 ZNF491Q8N8L2 437 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 RAX2Q96IS3 184 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 ST6GALNAC5Q9BVH7 336 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 FBXL15Q9H469 300 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 AURKAIP1Q9NWT8 199 aaPredicted RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 METTL1Q9UBP6 276 aaKnown RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 DAPK2Q9UIK4 370 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 FOXA2Q9Y261 457 aaPredicted RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 NUBP2Q9Y5Y2 271 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 ETV7Q9Y603 341 aa7.51□□□□□ -1.21
CHD7-208ENST00000528280 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
CHD7-208ENST00000528280 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 ATP6V0E1O15342 81 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 PROP1O75360 226 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 OR8U8P0C7N1 319 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 CD36P16671 472 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 CNTFRP26992 372 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 SDC2P34741 201 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 INSL3P51460 131 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 RAB25P57735 213 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 GNG2P59768 71 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 PLA2G7Q13093 441 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 IGSF11Q5DX21 431 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 DEFB121Q5J5C9 76 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 C9orf66Q5T8R8 295 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 SFXN4Q6P4A7 337 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 CNIH2Q6PI25 160 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 GLDNQ6ZMI3 551 aaPredicted RBP7.5□□□□□ -1.21
CHD7-208ENST00000528280 PPP1R27Q86WC6 154 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 ZNF383Q8NA42 475 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 OR1N2Q8NGR9 330 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 ABHD5Q8WTS1 349 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 CYYR1Q96J86 154 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 PARP12Q9H0J9 701 aaKnown RBP7.5□□□□□ -1.21
CHD7-208ENST00000528280 OR51E2Q9H255 320 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 DIABLOQ9NR28 239 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 SLC35D1Q9NTN3 355 aa7.5□□□□□ -1.21
CHD7-208ENST00000528280 LOC100506127A0A0U1RQW1 187 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 G3V318 75 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 CNIH1O95406 144 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 PRB2P02812 416 aaPredicted RBP7.49□□□□□ -1.21
CHD7-208ENST00000528280 LUMP51884 338 aaPredicted RBP7.49□□□□□ -1.21
CHD7-208ENST00000528280 DGCR2P98153 550 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 SPCS2Q15005 226 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 ACTBL2Q562R1 376 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms