RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ATP6V0E1O15342 81 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 SSX5O60225 188 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 RPLP1P05386 114 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 RRASP10301 218 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 RPS19P39019 145 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 LGALS7P47929 136 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 RPS16P62249 146 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 TMEM267Q0VDI3 215 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 PSG5Q15238 335 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF562Q6V9R5 426 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 ETV3LQ6ZN32 361 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 MRPL41Q8IXM3 137 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 TCTEX1D1Q8N7M0 179 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 MYOZ3Q8TDC0 251 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 NUDCD2Q8WVJ2 157 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 ADTRPQ96IZ2 230 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 P2RX4Q99571 388 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 SLC35D1Q9NTN3 355 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 ANXA10Q9UJ72 324 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR2W1Q9Y3N9 320 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 G3V318 75 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 FCN1O00602 326 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 SLC22A5O76082 557 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 HLA-DQB1P01920 261 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGKV1-16P04430 117 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGLL1P15814 213 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 LINC00205P59089 165 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 CX3CL1P78423 397 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 PLGLAQ15195 96 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 MINDY2Q8NBR6 621 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 S100A16Q96FQ6 103 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 PARP11Q9NR21 331 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 NUBP2Q9Y5Y2 271 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 WSB1Q9Y6I7 421 aa9.47□□□□□ -0.89
TRAPPC4-209ENST00000528230 CCL24O00175 119 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 XRCC3O43542 346 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 DUTP33316 252 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 TGFBR1P36897 503 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 LUMP51884 338 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 CBX3Q13185 183 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 KIAA0141Q14154 515 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 AKIRIN2Q53H80 203 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 TMEM177Q53S58 311 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 C19orf54Q5BKX5 351 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 TMEM65Q6PI78 240 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 HOGA1Q86XE5 327 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 DDB2Q92466 427 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 C5orf30Q96GV9 206 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 AUNIPQ9H7T9 357 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 CMYA5Q8N3K9 4069 aa9.46□□□□□ -0.9
TRAPPC4-209ENST00000528230 TUSC2O75896 110 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 IGLV2-23P01705 113 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 CRYGBP07316 175 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 NFYAP23511 347 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 CBX5P45973 191 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 RAB9AP51151 201 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 LSM3P62310 102 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 NDPQ00604 133 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 RUNX1Q01196 453 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 RTL8BQ17RB0 113 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 UBE2NLQ5JXB2 153 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 PPP1R27Q86WC6 154 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZNF645Q8N7E2 425 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 BVESQ8NE79 360 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 BEST4Q8NFU0 473 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 C4orf3Q8WVX3 66 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 SLC25A46Q96AG3 418 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 CMTM3Q96MX0 182 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 FUNDC2Q9BWH2 189 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 FBXO7Q9Y3I1 522 aa9.45□□□□□ -0.9
TRAPPC4-209ENST00000528230 SHOXO15266 292 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 SLC25A17O43808 307 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 CA2P00918 260 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 PYHIN1Q6K0P9 492 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 TEX45Q8NA69 505 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR5M8Q8NGP6 311 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 OSR1Q8TAX0 266 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 CLCC1Q96S66 551 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 KLK15Q9H2R5 256 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 VSIG4Q9Y279 399 aa9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 RBMX2Q9Y388 322 aaKnown RBP9.44□□□□□ -0.9
TRAPPC4-209ENST00000528230 A0A1W2PN81 502 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms