RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ARPC1BO15143 372 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 CA2P00918 260 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 CRYGBP07316 175 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 CLEC2LP0C7M8 214 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 PSMB9P28065 219 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 FGF9P31371 208 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 CHRNA7P36544 502 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 SERPINB10P48595 397 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 RPS16P62249 146 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 PJVKQ0ZLH3 352 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 PLGLAQ15195 96 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 MRGPRG-AS1Q2M3A8 158 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF562Q6V9R5 426 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 LFNGQ8NES3 379 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 PRR25Q96S07 402 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 YTHDF1Q9BYJ9 559 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 ATG5Q9H1Y0 275 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 OR51E2Q9H255 320 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 RNF167Q9H6Y7 350 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 FOXA2Q9Y261 457 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 TNCP24821 2201 aa8.08□□□□□ -1.12
PRPF40B-204ENST00000527253 SORL1Q92673 2214 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 NOTOA8MTQ0 251 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 SLC25A17O43808 307 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 GADD45AP24522 165 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 RANBP1P43487 201 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF260Q3ZCT1 412 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 CDNFQ49AH0 187 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 C9orf66Q5T8R8 295 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 UNQ5815/PRO19632Q6UWF5 114 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 Q6ZS49 121 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 PDPNQ86YL7 162 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 H1FOOQ8IZA3 346 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 OR10J5Q8NHC4 309 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 DCUN1D4Q92564 292 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 FLYWCH2Q96CP2 140 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 OR2D2Q9H210 308 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 SLC35D1Q9NTN3 355 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 STUB1Q9UNE7 303 aa8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 LSM4Q9Y4Z0 139 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-204ENST00000527253 IGHV4OR15-8A0A075B7B6 117 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 A0A087WW49 117 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 METTL21EPA6NDL7 271 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 LINC00473A8K010 186 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 SSX5O60225 188 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 SPDEFO95238 335 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 DIRAS3O95661 229 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 IGHV3-11P01762 117 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 APOA2P02652 100 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 OR8U8P0C7N1 319 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 SDC2P34741 201 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ECI1P42126 302 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 SLURP1P55000 103 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 MRPS15P82914 257 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF616Q08AN1 781 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ARFRP1Q13795 201 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 FXYD3Q14802 87 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 AKIRIN2Q53H80 203 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ACTBL2Q562R1 376 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF773Q6PK81 442 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 BVESQ8NE79 360 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 OR5H6Q8NGV6 325 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 ABHD5Q8WTS1 349 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 DDB2Q92466 427 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 FCGR1BQ92637 280 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 RHOVQ96L33 236 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 TSNAXQ99598 290 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 B9D2Q9BPU9 175 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 DAPK2Q9UIK4 370 aa8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 RRP15Q9Y3B9 282 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-204ENST00000527253 J3QRK9 145 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 RAMP3O60896 148 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 LGALS1P09382 135 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 DTYMKP23919 212 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 DUTP33316 252 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TALDO1P37837 337 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TMEM267Q0VDI3 215 aaPredicted RBP8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TMEM177Q53S58 311 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 HACD4Q5VWC8 232 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 SFXN4Q6P4A7 337 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TPRA1Q86W33 373 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TCTEX1D1Q8N7M0 179 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 OR5T1Q8NG75 326 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 GRPEL2Q8TAA5 225 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 LGALS14Q8TCE9 139 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 NUDCD2Q8WVJ2 157 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 ARPC1AQ92747 370 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 GINS4Q9BRT9 223 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 ST6GALNAC5Q9BVH7 336 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 Q9H521 79 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 SSR3Q9UNL2 185 aa8.05□□□□□ -1.12
PRPF40B-204ENST00000527253 TMEM235A6NFC5 223 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 LINC01619G3V211 115 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms