RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 LFNGQ8NES3 379 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 DLX4Q92988 240 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-210ENST00000525990 CHCHD6Q9BRQ6 235 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 CABLES2Q9BTV7 478 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 TOLLIPQ9H0E2 274 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 SDHAF2Q9NX18 166 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 ZNF221Q9UK13 617 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 MGAT4AQ9UM21 535 aa9.32□□□□□ -0.92
SSBP3-210ENST00000525990 LSM4Q9Y4Z0 139 aaKnown RBP9.32□□□□□ -0.92
SSBP3-210ENST00000525990 TRBV6-7A0A0A0MS04 114 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 TRDV1A0A1B0GX56 115 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 PDCD5O14737 125 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 ATP6V1G2O95670 118 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 IGLV2-23P01705 113 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 OR8U8P0C7N1 319 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 HIST1H1DP16402 221 aaKnown RBP9.31□□□□□ -0.92
SSBP3-210ENST00000525990 MYL9P24844 172 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 ACTBL2Q562R1 376 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 SPARTQ8N0X7 666 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 SLC35D1Q9NTN3 355 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 RAB26Q9ULW5 256 aa9.31□□□□□ -0.92
SSBP3-210ENST00000525990 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
SSBP3-210ENST00000525990 J3QRK9 145 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 RAMP3O60896 148 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 RBBP9O75884 186 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 LGALS1P09382 135 aaKnown RBP9.3□□□□□ -0.92
SSBP3-210ENST00000525990 PSMB9P28065 219 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 PSMD7P51665 324 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 TPPP2P59282 170 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 GABARAPL2P60520 117 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 UBE2UQ5VVX9 321 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 PDPNQ86YL7 162 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 ARPC1AQ92747 370 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 ASCL2Q99929 193 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 ATG5Q9H1Y0 275 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 RNF167Q9H6Y7 350 aa9.3□□□□□ -0.92
SSBP3-210ENST00000525990 TXNL4BQ9NX01 149 aaKnown RBP9.3□□□□□ -0.92
SSBP3-210ENST00000525990 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-210ENST00000525990 LINC01619G3V211 115 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 OVOL1O14753 267 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 LY86O95711 162 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 APOA2P02652 100 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 CRYGBP07316 175 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 APELAP0DMC3 54 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 RAB6AP20340 208 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 GADD45AP24522 165 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 MRPS15P82914 257 aaKnown RBP9.29□□□□□ -0.92
SSBP3-210ENST00000525990 ARFRP1Q13795 201 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 FXYD3Q14802 87 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 ZNF562Q6V9R5 426 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 IDO2Q6ZQW0 420 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 BVESQ8NE79 360 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 OR10J5Q8NHC4 309 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 FLYWCH2Q96CP2 140 aaKnown RBP9.29□□□□□ -0.92
SSBP3-210ENST00000525990 TSNAXQ99598 290 aaKnown RBP9.29□□□□□ -0.92
SSBP3-210ENST00000525990 RNF5Q99942 180 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 OR51E2Q9H255 320 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 TNCP24821 2201 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 SORL1Q92673 2214 aa9.29□□□□□ -0.92
SSBP3-210ENST00000525990 LINC00473A8K010 186 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 SAP30O75446 220 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
SSBP3-210ENST00000525990 SPDEFO95238 335 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 TRGV3P03979 118 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 CLEC2LP0C7M8 214 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 SERPINB10P48595 397 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 H1FOOQ8IZA3 346 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-210ENST00000525990 TCTEX1D1Q8N7M0 179 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-210ENST00000525990 LGALS14Q8TCE9 139 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 NUDCD2Q8WVJ2 157 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 HARBI1Q96MB7 349 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 DAPK2Q9UIK4 370 aa9.28□□□□□ -0.92
SSBP3-210ENST00000525990 TMEM235A6NFC5 223 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 SPNP16150 400 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 FGF9P31371 208 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-210ENST00000525990 TAGLNQ01995 201 aaKnown RBP9.27□□□□□ -0.93
SSBP3-210ENST00000525990 TMEM267Q0VDI3 215 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-210ENST00000525990 CDNFQ49AH0 187 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 DDB2Q92466 427 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 RHOVQ96L33 236 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 GINS4Q9BRT9 223 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 ZNF355PQ9NSJ1 428 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 ADAM30Q9UKF2 790 aa9.27□□□□□ -0.93
SSBP3-210ENST00000525990 RBM7Q9Y580 266 aaKnown RBP9.27□□□□□ -0.93
SSBP3-210ENST00000525990 IGKV1D-13A0A0B4J2D9 117 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 ANKRD34BA5PLL1 514 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 METTL21EPA6NDL7 271 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 NOTOA8MTQ0 251 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 SHOXO15266 292 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 SSX5O60225 188 aa9.26□□□□□ -0.93
SSBP3-210ENST00000525990 CNIH1O95406 144 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms