RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TSNAXQ99598 290 aaKnown RBP9.91□□□□□ -0.82
CCNC-216ENST00000523961 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
CCNC-216ENST00000523961 IGKV1D-13A0A0B4J2D9 117 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 AP4M1O00189 453 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 CTDSP2O14595 271 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 RRHO14718 337 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 IGKV1-13P0DP09 117 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 RRASP10301 218 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 CD28P10747 220 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 AADACP22760 399 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
CCNC-216ENST00000523961 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
CCNC-216ENST00000523961 RTL8BQ17RB0 113 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 C2orf68Q2NKX9 166 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 OR5H2Q8NGV7 314 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 GIMAP1Q8WWP7 306 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 FLYWCH2Q96CP2 140 aaKnown RBP9.9□□□□□ -0.82
CCNC-216ENST00000523961 MIXL1Q9H2W2 232 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 EHFQ9NZC4 300 aa9.9□□□□□ -0.82
CCNC-216ENST00000523961 ZNF107Q9UII5 783 aaPredicted RBP9.9□□□□□ -0.82
CCNC-216ENST00000523961 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
CCNC-216ENST00000523961 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 SPDEFO95238 335 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 PPYP01298 95 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 RCVRNP35243 200 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 LGALS7P47929 136 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 SLC35B1P78383 322 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 PLGLAQ15195 96 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 MSMO1Q15800 293 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 LIN54Q6MZP7 749 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 OVCH2Q7RTZ1 564 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 LAX1Q8IWV1 398 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 STPG2Q8N412 459 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 NOL4LQ96MY1 436 aaPredicted RBP9.89□□□□□ -0.83
CCNC-216ENST00000523961 HSPB9Q9BQS6 159 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 GON7Q9BXV9 100 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 RSL24D1Q9UHA3 163 aaKnown RBP9.89□□□□□ -0.83
CCNC-216ENST00000523961 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
CCNC-216ENST00000523961 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 LINC00473A8K010 186 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 ZNF701M0R085 212 aaPredicted RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 PMP2P02689 132 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 OPN1MWP04001 364 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 CSF1P09603 554 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 OPN1MW2P0DN77 364 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 OPN1MW3P0DN78 364 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 RFX2P48378 723 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 HERV-K104P61576 105 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 CD83Q01151 205 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 DYRK1AQ13627 763 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 PSG5Q15238 335 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 KCTD9Q7L273 389 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 LYSMD2Q8IV50 215 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 ZBTB34Q8NCN2 500 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 BVESQ8NE79 360 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 SECTM1Q8WVN6 248 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 DDB2Q92466 427 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 HSD17B10Q99714 261 aaKnown RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 CITED2Q99967 270 aaPredicted RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 SLIRPQ9GZT3 109 aaKnown RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 C6orf62Q9GZU0 229 aaPredicted RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 SLC5A7Q9GZV3 580 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 RBM38Q9H0Z9 239 aaKnown RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 FBXL15Q9H469 300 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
CCNC-216ENST00000523961 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 ZNF580Q9UK33 172 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
CCNC-216ENST00000523961 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
CCNC-216ENST00000523961 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 SHOXO15266 292 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 IGLV2-14P01704 120 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 IGF1P05019 195 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 HLA-DMAP28067 261 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 HRH1P35367 487 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 FXYD4P59646 89 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 MRPS10P82664 201 aaKnown RBP9.87□□□□□ -0.83
CCNC-216ENST00000523961 TMEM177Q53S58 311 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 ZNF660Q6AZW8 331 aaPredicted RBP9.87□□□□□ -0.83
CCNC-216ENST00000523961 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 ZNF66Q6ZN08 573 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 OR52I2Q8NH67 350 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 MCFD2Q8NI22 146 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 FCAMRQ8WWV6 532 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 BORCS5Q969J3 196 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 DIRAS2Q96HU8 199 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 HARBI1Q96MB7 349 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 ABHD1Q96SE0 405 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 ZNF2Q9BSG1 426 aaPredicted RBP9.87□□□□□ -0.83
CCNC-216ENST00000523961 OR51J1Q9H342 316 aa9.87□□□□□ -0.83
CCNC-216ENST00000523961 CCL28Q9NRJ3 127 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms