RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 S1PR3Q99500 378 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A087X0M5 115 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A1B0GX30 115 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 KIAA1324LA8MWY0 1029 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 K7EPK0 472 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 PET100P0DJ07 73 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 COX7A1P24310 79 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 REG1BP48304 166 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 LCN2P80188 198 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 Q6ZRM9 215 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 TMUB2Q71RG4 321 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 FAM71E2Q8N5Q1 922 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 TCTEX1D1Q8N7M0 179 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF383Q8NA42 475 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 FAM168AQ92567 244 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 CRYBG3Q68DQ2 2970 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 RNF222A6NCQ9 220 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 DEDDO75618 318 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 S100A1P23297 94 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 SMCO1Q147U7 214 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 DDB2Q92466 427 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
CTNNA1-236ENST00000522792 IGHV2-26A0A0B4J1V2 119 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 TOR1AO14656 332 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 LYL1P12980 280 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 THBS3P49746 956 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 KRTAP10-9P60411 292 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 LMO4P61968 165 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 OPCMLQ14982 345 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF833PQ6ZTB9 187 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 Q8N7P7 452 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 INO80EQ8NBZ0 244 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 MRPL20Q9BYC9 149 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 SIRT7Q9NRC8 400 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 hCG_1809904A0A1W2PP81 198 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A1W2PPE2 198 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A1W2PR64 198 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A1W2PRV1 198 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 MSGN1A6NI15 193 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 RLN2P04090 185 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 CT45A6P0DMU7 189 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 CT45A5P0DMU8 189 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 CT45A7P0DMV0 189 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 S100A11P31949 105 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 C8orf31Q8N9H6 132 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF596Q8TC21 504 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 R3HDM4Q96D70 268 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 BARX1Q9HBU1 254 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 MMP24Q9Y5R2 645 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
CTNNA1-236ENST00000522792 ARHGAP32A7KAX9 2087 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 TENM4Q6N022 2769 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 A0A1B0GU03 582 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 RBP4P02753 201 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 ACOT7LQ6ZUV0 252 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 SLC7A5P1Q8MH63 180 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 ARID1AO14497 2285 aa12.58□□□□□ -0.4
CTNNA1-236ENST00000522792 SSSCA1O60232 199 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 CRYZL1O95825 349 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 HPRT1P00492 218 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 KIR2DS2P43631 304 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 SSX9Q7RTT3 188 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 VKORC1L1Q8N0U8 176 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 PNKDQ8N490 385 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 ADTRPQ96IZ2 230 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 GON7Q9BXV9 100 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 SLA2Q9H6Q3 261 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 HEXA-AS1Q9H8Q6 139 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 TACC2O95359 2948 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 FBN2P35556 2912 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 PITX3O75364 302 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 ATG12O94817 140 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 OR2F2O95006 317 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 SLC25A6P12236 298 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 OR2F1Q13607 317 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 KCNRGQ8N5I3 272 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms