RNA–Protein interactions for RNA: ENST00000522245.1

PTK2B-215, Transcript of protein tyrosine kinase 2 beta, human

TSL 2

Gene PTK2B, Length 762 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2B-215	ENST00000522245	APOA2	P02652	100 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	OR5H8	P0DN80	308 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	THBS3	P49746	956 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	VBP1	P61758	197 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	RPS16	P62249	146 aa	Known RBP	13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	CTF1	Q16619	201 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	UBE2NL	Q5JXB2	153 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	MRPL41	Q8IXM3	137 aa	Known RBP	13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	LINC00482	Q8N8I6	264 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	RNF152	Q8N8N0	203 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	CMTM3	Q96MX0	182 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	AUNIP	Q9H7T9	357 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	SDHAF2	Q9NX18	166 aa		13.65	□□□□□ -0.22
PTK2B-215	ENST00000522245	NOTCH1	P46531	2555 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	TRAV41	A0A0B4J266	112 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	FCN1	O00602	326 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	SSX5	O60225	188 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	IGKV1-16	P04430	117 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	SLC6A1	P30531	599 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	MYCNOS	P40205	109 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	NDP	Q00604	133 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	PSG5	Q15238	335 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	CNIH2	Q6PI25	160 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	GPR141	Q7Z602	305 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	PDPN	Q86YL7	162 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	ACOT12	Q8WYK0	555 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	C5orf30	Q96GV9	206 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	RCC1L	Q96I51	464 aa	Known RBP	13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	CLCC1	Q96S66	551 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	SLC35D1	Q9NTN3	355 aa		13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	METTL1	Q9UBP6	276 aa	Known RBP	13.64	□□□□□ -0.23
PTK2B-215	ENST00000522245	PSMB8	P28062	276 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	PPIF	P30405	207 aa	Known RBP	13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	RORC	P51449	518 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	CX3CL1	P78423	397 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	SAMD12	Q8N8I0	201 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	FLYWCH2	Q96CP2	140 aa	Known RBP	13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	RAX2	Q96IS3	184 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	DUX3	Q96PT4	197 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	TSNAX	Q99598	290 aa	Known RBP	13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245	ANXA10	Q9UJ72	324 aa		13.63	□□□□□ -0.23
PTK2B-215	ENST00000522245		J3QRK9	145 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	CBX5	P45973	191 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	CDX1	P47902	265 aa	Predicted RBP	13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	GPR107	Q5VW38	600 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	FOXB2	Q5VYV0	432 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	TMEM65	Q6PI78	240 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	HOGA1	Q86XE5	327 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	ABHD5	Q8WTS1	349 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	P2RX4	Q99571	388 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	NAA50	Q9GZZ1	169 aa	Known RBP	13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	KLK15	Q9H2R5	256 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	NECAP2	Q9NVZ3	263 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	FBXO7	Q9Y3I1	522 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	A3GALT2	U3KPV4	340 aa		13.62	□□□□□ -0.23
PTK2B-215	ENST00000522245	CCL24	O00175	119 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	SPDEF	O95238	335 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	APOA1	P02647	267 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	NFYA	P23511	347 aa	Predicted RBP	13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	TAGLN	Q01995	201 aa	Known RBP	13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	ECSCR	Q19T08	205 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	DEFB136	Q30KP8	78 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	MINDY2	Q8NBR6	621 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	BVES	Q8NE79	360 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	AP3S1	Q92572	193 aa		13.61	□□□□□ -0.23
PTK2B-215	ENST00000522245	SLC25A17	O43808	307 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	DUS4L	O95620	317 aa	Known RBP	13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	CA2	P00918	260 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	IGLV1-40	P01703	118 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	EGR2	P11161	476 aa	Predicted RBP	13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	CBX3	Q13185	183 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	TMEM69	Q5SWH9	247 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	ZNF562	Q6V9R5	426 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	REC114	Q7Z4M0	266 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	BEST4	Q8NFU0	473 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	TPSG1	Q9NRR2	321 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	OR2W1	Q9Y3N9	320 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	PLXNB1	O43157	2135 aa		13.6	□□□□□ -0.23
PTK2B-215	ENST00000522245	SLC22A5	O76082	557 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	IGLV2-23	P01705	113 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	HLA-DQB1	P01920	261 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	ZNF182	P17025	639 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	DUT	P33316	252 aa	Known RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	RPL5	P46777	297 aa	Known RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	LGALS7	P47929	136 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	LUM	P51884	338 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	CRIP2	P52943	208 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	RAB25	P57735	213 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	KIAA0141	Q14154	515 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	RTL8B	Q17RB0	113 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	C19orf54	Q5BKX5	351 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	MZT2A	Q6P582	158 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	PPP1R27	Q86WC6	154 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	MYOZ3	Q8TDC0	251 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	C4orf3	Q8WVX3	66 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	ADTRP	Q96IZ2	230 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	BCL7B	Q9BQE9	202 aa		13.59	□□□□□ -0.23
PTK2B-215	ENST00000522245	FAM103A1	Q9BTL3	118 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms