RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LPCAT4Q643R3 524 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 DMKNQ6E0U4 476 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 UNQ9165/PRO28630Q6UXU0 137 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 LINC00596Q86U02 117 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 APRG1Q8IVJ8 170 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 HS3ST5Q8IZT8 346 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 DRAXINQ8NBI3 349 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 GALNT14Q96FL9 552 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 TMEM68Q96MH6 324 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 TRAPPC2LQ9UL33 140 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 ING4Q9UNL4 249 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 WASHC3Q9Y3C0 194 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 A0A1W2PP11 408 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 MPTX1A8MV57 137 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 H7C2Y5 167 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 YPEL1O60688 119 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 GGCTO75223 188 aaKnown RBP6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OCM2P0CE71 109 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OCMP0CE72 109 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 MC5RP33032 325 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 LGALS7P47929 136 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 CRISP1P54107 249 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 ATP5G2Q06055 141 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 TP53I3Q53FA7 332 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 FAM71F2Q6NXP2 309 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF529Q6P280 563 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 SPATA12Q7Z6I5 190 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 NR2C2APQ86WQ0 139 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF383Q8NA42 475 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR51A2Q8NGJ7 313 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR52N1Q8NH53 320 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR4A5Q8NH83 315 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 GIPC3Q8TF64 312 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 TNFAIP8L1Q8WVP5 186 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 YPEL2Q96QA6 119 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR14A2Q96R54 314 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 AGMATQ9BSE5 352 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 ALG8Q9BVK2 526 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 REEP1Q9H902 201 aa6.37□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF320A2RRD8 509 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 FAM223BA6NKX1 122 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR4C45A6NMZ5 311 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 SRRM4A7MD48 611 aaKnown RBP6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 SPDEFO95238 335 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 SCTP09683 121 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR9G9P0C7N8 305 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 ATP6V1B2P21281 511 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 PRKACGP22612 351 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 XGP55808 180 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 HTD2P86397 168 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF85Q03923 595 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 RSU1Q15404 277 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 C15orf32Q32M92 178 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 ATAD3CQ5T2N8 411 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 C6orf183Q5T699 404 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 Q5VSD8 79 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF767PQ75MW2 155 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 FAM223AQ8IWN6 122 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 THRSPQ92748 146 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 ABHD14BQ96IU4 210 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 SPAG8Q99932 426 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 JPT1Q9UK76 154 aa6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 RPL36Q9Y3U8 105 aaKnown RBP6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
TRAPPC9-212ENST00000521944 DEFB131BA0A096LNP1 70 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 IGHV4-28A0A0C4DH34 117 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 TSPAN4O14817 238 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 IFNA10P01566 189 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 IGHV3-23P01764 117 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 MAS1P04201 325 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2T7P0C7T2 308 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 EPHA2P29317 976 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 GAGE13Q4V321 117 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF585BQ52M93 769 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 RBPMS2Q6ZRY4 209 aaKnown RBP6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 C19orf35Q6ZS72 473 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 ZNF367Q7RTV3 350 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 SLC38A6Q8IZM9 456 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 PARP16Q8N5Y8 322 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 SETD9Q8NE22 299 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR13C3Q8NGS6 347 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 NEK7Q8TDX7 302 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 TSNAXQ99598 290 aaKnown RBP6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 SULT4A1Q9BR01 284 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 FGFR1OP2Q9NVK5 253 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 IL36GQ9NZH8 169 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
TRAPPC9-212ENST00000521944 RAB29O14966 203 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 SC5DO75845 299 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2J3O76001 311 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms