RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RPS16P62249 146 aaKnown RBP16.2■□□□□ 0.18
TRIM35-203ENST00000521253 NDPQ00604 133 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 PLGLAQ15195 96 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 PSG5Q15238 335 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 GPR141Q7Z602 305 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 FLYWCH2Q96CP2 140 aaKnown RBP16.2■□□□□ 0.18
TRIM35-203ENST00000521253 TSNAXQ99598 290 aaKnown RBP16.2■□□□□ 0.18
TRIM35-203ENST00000521253 PARP11Q9NR21 331 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 NOTCH3Q9UM47 2321 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 IGKV1D-13A0A0B4J2D9 117 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 MEIS3P1A6NDR6 274 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 G3V318 75 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 TUSC2O75896 110 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 EIF4EP06730 217 aaKnown RBP16.19■□□□□ 0.18
TRIM35-203ENST00000521253 IGKV1-13P0DP09 117 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 THBS3P49746 956 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 RORCP51449 518 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 LCNL1Q6ZST4 164 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 C18orf65Q6ZTR6 163 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 C1QL4Q86Z23 238 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 ZNF645Q8N7E2 425 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 SNAPC3Q92966 411 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 ZFP57Q9NU63 452 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 METTL1Q9UBP6 276 aaKnown RBP16.19■□□□□ 0.18
TRIM35-203ENST00000521253 WSB1Q9Y6I7 421 aa16.19■□□□□ 0.18
TRIM35-203ENST00000521253 SPDEFO95238 335 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 IGHG4P01861 327 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 RPLP1P05386 114 aaKnown RBP16.18■□□□□ 0.18
TRIM35-203ENST00000521253 ELANEP08246 267 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 OR5H8P0DN80 308 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 DUTP33316 252 aaKnown RBP16.18■□□□□ 0.18
TRIM35-203ENST00000521253 CBX5P45973 191 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 CX3CL1P78423 397 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 DEFA6Q01524 100 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 TAGLNQ01995 201 aaKnown RBP16.18■□□□□ 0.18
TRIM35-203ENST00000521253 FOXE3Q13461 319 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 ZNF660Q6AZW8 331 aaPredicted RBP16.18■□□□□ 0.18
TRIM35-203ENST00000521253 BVESQ8NE79 360 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 ACOT12Q8WYK0 555 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 DDB2Q92466 427 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 CLCC1Q96S66 551 aa16.18■□□□□ 0.18
TRIM35-203ENST00000521253 LINC00473A8K010 186 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 G3V4G9 280 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 IGLV2-14P01704 120 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 APOA1P02647 267 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 CXorf66Q5JRM2 361 aaPredicted RBP16.17■□□□□ 0.18
TRIM35-203ENST00000521253 RNF152Q8N8N0 203 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 ADTRPQ96IZ2 230 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 CMTM3Q96MX0 182 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 TPSG1Q9NRR2 321 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 FBXO7Q9Y3I1 522 aa16.17■□□□□ 0.18
TRIM35-203ENST00000521253 TRAV41A0A0B4J266 112 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 SLC25A17O43808 307 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 IGLV2-23P01705 113 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 PF4P02776 101 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 RRASP10301 218 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 PPIFP30405 207 aaKnown RBP16.16■□□□□ 0.18
TRIM35-203ENST00000521253 FCGR2CP31995 323 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 RTL8BQ17RB0 113 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 TMEM177Q53S58 311 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 C8orf86Q6ZUL3 223 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 KLHL30-AS1Q8NEE0 82 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 HARBI1Q96MB7 349 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 IFT46Q9NQC8 304 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
TRIM35-203ENST00000521253 RBMX2Q9Y388 322 aaKnown RBP16.16■□□□□ 0.18
TRIM35-203ENST00000521253 NUDT19A8MXV4 375 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 HPGDSO60760 199 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 SLC22A5O76082 557 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 CA2P00918 260 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 ELK1P19419 428 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 AADACP22760 399 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 PSMB8P28062 276 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 LGALS7P47929 136 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 CBX3Q13185 183 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 ECSCRQ19T08 205 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 SAMD5Q5TGI4 173 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 ETV3LQ6ZN32 361 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 ZNF695Q8IW36 515 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 WFDC9Q8NEX5 89 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 OR5AP2Q8NGF4 316 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 ANAPC10Q9UM13 185 aa16.15■□□□□ 0.18
TRIM35-203ENST00000521253 SRRM4A7MD48 611 aaKnown RBP16.14■□□□□ 0.17
TRIM35-203ENST00000521253 SHOXO15266 292 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 EGR2P11161 476 aaPredicted RBP16.14■□□□□ 0.17
TRIM35-203ENST00000521253 ZNF182P17025 639 aaPredicted RBP16.14■□□□□ 0.17
TRIM35-203ENST00000521253 SLC6A1P30531 599 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 PRSS3P35030 304 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 CRIP2P52943 208 aaPredicted RBP16.14■□□□□ 0.17
TRIM35-203ENST00000521253 C19orf54Q5BKX5 351 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 ZNF562Q6V9R5 426 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 MINDY2Q8NBR6 621 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 ABHD5Q8WTS1 349 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 AP3S1Q92572 193 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 MRPS7Q9Y2R9 242 aaKnown RBP16.14■□□□□ 0.17
TRIM35-203ENST00000521253 A3GALT2U3KPV4 340 aa16.14■□□□□ 0.17
TRIM35-203ENST00000521253 PLXNB1O43157 2135 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 SMIM31A0A1B0GVY4 71 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CRYZL1O95825 349 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 PPYP01298 95 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms