RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 IGKV1-27A0A075B6S5 117 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 TRBV7-9A0A0J9YWB2 115 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 TRAPPC2LH3BP13 241 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 EFNA2O43921 213 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 B4GALT1P15291 398 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 AMTP48728 403 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 ALKBH6Q3KRA9 238 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 RAET1LQ5VY80 246 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 KCNIP4Q6PIL6 250 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 OSR2Q8N2R0 312 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 NOXO1Q8NFA2 376 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 PSMF1Q92530 271 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 PCDH15Q96QU1 1955 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 IGKV1-12A0A0C4DH73 117 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 FRG2CA6NGY1 282 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 DHRS3O75911 302 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 NAPSAO96009 420 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 KRASP01116 189 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 IGKV1D-12P01611 117 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 CD99P14209 185 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 EDDM3BP56851 147 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 GABRA6Q16445 453 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 Q6ZWC4 215 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF721Q8TF20 911 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 BADQ92934 168 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 Q96M66 194 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 POLEQ07864 2286 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 COL6A3P12111 3177 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 ATP5G3P48201 142 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 PHYHD1Q5SRE7 291 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 Q6ZRM9 215 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 C5orf17Q8NAS9 161 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 OR5AU1Q8NGC0 362 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 OR10G3Q8NGC4 313 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF501Q96CX3 271 aaPredicted RBP8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 VWCEQ96DN2 955 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 LRFN3Q9BTN0 628 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM222Q9H0R3 208 aa8.62□□□□□ -1.03
PDGFRB-207ENST00000520579 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CFPP27918 469 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM249Q2WGJ8 235 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 FAM58AQ8N1B3 248 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 TCTEX1D1Q8N7M0 179 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 SIGLECL1Q8N7X8 197 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM170AQ8WVE7 144 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 SERTAD4Q9NUC0 356 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM38BQ9NVV0 291 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CACNA1GO43497 2377 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 LIPT2A6NK58 231 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 IGHV3-13P01766 116 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 IGHV3-7P01780 117 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CRISP2P16562 243 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 PDLIM4P50479 330 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF816Q0VGE8 651 aaPredicted RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 SHHQ15465 462 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 HES3Q5TGS1 186 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 SLC22A18ASQ8N1D0 253 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 ULBP2Q9BZM5 246 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CEACAM18A8MTB9 384 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 C9orf172C9J069 976 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 FCN1O00602 326 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 ZIC3O60481 467 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 HYPMO75409 117 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 NRASP01111 189 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 MGST1P10620 155 aaKnown RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 KITLGP21583 273 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CD38P28907 300 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 LHX2P50458 406 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF133P52736 654 aaPredicted RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 AESQ08117 197 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 HIST3H3Q16695 136 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 OR10G9Q8NGN4 311 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 OR10G7Q8NGN6 311 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 SNIP1Q8TAD8 396 aaKnown RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 PSG11Q9UQ72 335 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 TRIOBPQ9H2D6 2365 aa8.61□□□□□ -1.03
PDGFRB-207ENST00000520579 MDFIC2A0A1B0GVS7 189 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 C11orf94C9JXX5 98 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 NPIPB7O75200 414 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 ODF3L1Q8IXM7 274 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 RPP25LQ8N5L8 163 aaKnown RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 OR2M3Q8NG83 312 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 KCNE4Q8WWG9 221 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 GUCD1Q96NT3 240 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 GVINP1Q7Z2Y8 2422 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 FREM1Q5H8C1 2179 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 CXorf51AA0A1B0GTR3 108 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms