RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 DRAXINQ8NBI3 349 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 OR4S2Q8NH73 311 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 ST6GALNAC6Q969X2 333 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF251Q9BRH9 671 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM222Q9H0R3 208 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 FAM212BQ9NTI7 297 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 SLC35D1Q9NTN3 355 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 SHPKQ9UHJ6 478 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 CENPVL3A0A0U1RRI6 287 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 DUXBA0A1W2PPF3 345 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 LINC00473A8K010 186 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 GOSR2O14653 212 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RBFOX2O43251 390 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSMD1-208ENST00000520561 PROP1O75360 226 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 ATG12O94817 140 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV1-69P01742 117 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 TRAPPC2P0DI81 140 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 TRAPPC2BP0DI82 140 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 CT45A6P0DMU7 189 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 CT45A5P0DMU8 189 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 CT45A7P0DMV0 189 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RRASP10301 218 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RPA2P15927 270 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 SAA4P35542 130 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RRAS2P62070 204 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-208ENST00000520561 ANKRD55Q3KP44 614 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM268Q5VZI3 342 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 DHRS7BQ6IAN0 325 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-208ENST00000520561 LIN54Q6MZP7 749 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 PDPNQ86YL7 162 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 CADM3Q8N126 398 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 OR8H3Q8N146 312 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF383Q8NA42 475 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RNASE11Q8TAA1 199 aaKnown RBP7.26□□□□□ -1.25
CSMD1-208ENST00000520561 GLYATL2Q8WU03 294 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
CSMD1-208ENST00000520561 IL22RA2Q969J5 263 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 NABP2Q9BQ15 211 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 PRR13Q9NZ81 148 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 COMMD9Q9P000 198 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 WASHC3Q9Y3C0 194 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 ARHGAP32A7KAX9 2087 aa7.26□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV3OR16-10A0A075B7F0 116 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV1-3A0A0C4DH29 117 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 HMX3A6NHT5 357 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 H0YJW9 148 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 H7C2Y5 167 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 CRYZL1O95825 349 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 IFNA21P01568 189 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 IGHV4-38-2P0DP08 117 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 MC5RP33032 325 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 AKR1C2P52895 323 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 ERVK-16P61578 105 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 DIAPH2-AS1Q14236 149 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 FCN2Q15485 313 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 RUSC1-AS1Q66K80 236 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 C1orf229Q6ZS94 237 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-208ENST00000520561 LHFPL4Q7Z7J7 247 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 MOB3BQ86TA1 216 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 SLC35G3Q8N808 338 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 LRTM2Q8N967 370 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 OR5AN1Q8NGI8 311 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 DDB2Q92466 427 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM56Q96MV1 263 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 RAB18Q9NP72 206 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 MGAT4CQ9UBM8 478 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 HILPDAQ9Y5L2 63 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM56-RWDD3S4R434 201 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 APCP25054 2843 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 CREBBPQ92793 2442 aa7.25□□□□□ -1.25
CSMD1-208ENST00000520561 A0A1W2PPI3 338 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 A8MV72 311 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-208ENST00000520561 CCSO14618 274 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 TIMM23O14925 209 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 CD5LO43866 347 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 RAMP3O60896 148 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 S1PR2O95136 353 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 CDS2O95674 445 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 HPRT1P00492 218 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 HOXB5P09067 269 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 SULT1A3P0DMM9 295 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 SULT1A4P0DMN0 295 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 LPAR6P43657 344 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 BPIFB3P59826 476 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 SSX2Q16385 188 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF585BQ52M93 769 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 THOC7Q6I9Y2 204 aaKnown RBP7.24□□□□□ -1.25
CSMD1-208ENST00000520561 GSG1LQ6UXU4 331 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 BRD3OSQ6XYD6 125 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 AKAP14Q86UN6 197 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 SELENOHQ8IZQ5 122 aaKnown RBP7.24□□□□□ -1.25
CSMD1-208ENST00000520561 OR5M8Q8NGP6 311 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 LHFPL5Q8TAF8 219 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 NANPQ8TBE9 248 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 MALSU1Q96EH3 234 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 RRNAD1Q96FB5 475 aaKnown RBP7.24□□□□□ -1.25
CSMD1-208ENST00000520561 C18orf12Q96KH6 178 aa7.24□□□□□ -1.25
CSMD1-208ENST00000520561 SPIN2AQ99865 258 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms