RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ITPR3Q14573 2671 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 VPS13CQ709C8 3753 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TRBV24-1A0A075B6N3 115 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 IGKV1D-13A0A0B4J2D9 117 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM210A6NLX4 147 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 ZFP92A6NM28 416 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF729A6NN14 1252 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 C17orf112F2Z3M2 114 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM250H0YL14 139 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 HSPB6O14558 160 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 IGHV2-70P01814 119 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 IGKV1-13P0DP09 117 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 PSG2P11465 335 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 PSMB3P49720 205 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 DEFA6Q01524 100 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 SLC38A11Q08AI6 406 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 PDCD1Q15116 288 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TBC1D28Q2M2D7 210 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 LRRC75BQ2VPJ9 315 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 NCMAPQ5T1S8 102 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 NCR3LG1Q68D85 454 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 Q6ZPA2 131 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 CYP2G1PQ6ZSU1 146 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 Q71RC1 249 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 P4HA3Q7Z4N8 544 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TGIF2LYQ8IUE0 185 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF525Q8N782 197 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 OR2M7Q8NG81 312 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 OR51H1Q8NH63 302 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 FGFBP3Q8TAT2 258 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM216AQ8WUB2 273 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM147Q9BVK8 224 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 MTCH1Q9NZJ7 389 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 HCFC1P51610 2035 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 DNHD1Q96M86 4753 aa7.28□□□□□ -1.24
CTNNA1-223ENST00000520520 TRAV20A0A0B4J274 112 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 CTXND1A0A1B0GTU2 59 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 TMEM30CPA0ZSE6 113 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 SMCO3A2RU48 225 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 PINLYPA6NC86 204 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 OR5H1A6NKK0 313 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 CEBPZOSA8MTT3 80 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 ZNF727A8MUV8 499 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 TNFSF12O43508 249 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 HLA-HP01893 362 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 LHX2P50458 406 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 PAX9P55771 341 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 CCL20P78556 96 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 TFF3Q07654 80 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 FAM90A2PQ658T7 463 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 ZNF709Q8N972 641 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 ZNF845Q96IR2 970 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 POM121L2Q96KW2 1035 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 WDR61Q9GZS3 305 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 DEPPQ9NTK1 212 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 DOK5Q9P104 306 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 TRAPPC2LQ9UL33 140 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 ALPK2Q86TB3 2170 aa7.27□□□□□ -1.25
CTNNA1-223ENST00000520520 TRAV24A0A0B4J272 114 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 IGKV1-6A0A0C4DH72 117 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 UBE2L5PA0A1B0GUS4 154 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 H3BP45 60 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HS3ST1O14792 307 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 SH2D1BO14796 132 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 SYNGR1O43759 233 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BKO60814 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 KBTBD11O94819 623 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 TMEM50AO95807 157 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BJP06899 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 RFPL3SP0C7P2 107 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 METTL15P1P0C7V9 234 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 ZNF16P17020 682 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 COX5AP20674 150 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BOP23527 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BBP33778 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 NTF4P34130 210 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 CLDN18P56856 261 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BDP58876 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST1H2BCP62807 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 MEF2BQ02080 365 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 DAZAP2Q15038 168 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST2H2BEQ16778 126 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 ACOT6Q3I5F7 207 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 OR2B11Q5JQS5 317 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 OR2T2Q6IF00 324 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 TRAT1Q6PIZ9 186 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 ZNF497Q6ZNH5 498 aa7.26□□□□□ -1.25
CTNNA1-223ENST00000520520 HIST3H2BBQ8N257 126 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms