RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 IGLL1P15814 213 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 MC5RP33032 325 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 SLC35B1P78383 322 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 CX3CL1P78423 397 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 PITPNAQ00169 270 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 KIAA0141Q14154 515 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 CTF1Q16619 201 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 DEFB136Q30KP8 78 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 C19orf54Q5BKX5 351 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 TEX38Q6PEX7 206 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 CNIH2Q6PI25 160 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 BEST4Q8NFU0 473 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 DDB2Q92466 427 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 SNAPC3Q92966 411 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 KIAA1456Q9P272 454 aa10.4□□□□□ -0.74
VEGFA-219ENST00000518824 METTL1Q9UBP6 276 aaKnown RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 RBM7Q9Y580 266 aaKnown RBP10.4□□□□□ -0.74
VEGFA-219ENST00000518824 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
VEGFA-219ENST00000518824 XRCC3O43542 346 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 SLC25A17O43808 307 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 IGHG4P01861 327 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 PF4P02776 101 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 CRYGBP07316 175 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 VDAC1P21796 283 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 PSMB8P28062 276 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
VEGFA-219ENST00000518824 ALDH3B2P48448 385 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 THBS3P49746 956 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 PLGLAQ15195 96 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 ECSCRQ19T08 205 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 MRGPRG-AS1Q2M3A8 158 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 GPR107Q5VW38 600 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 HOGA1Q86XE5 327 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 PDPNQ86YL7 162 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 LINC00482Q8N8I6 264 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 COMMD3Q9UBI1 195 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 A3GALT2U3KPV4 340 aa10.39□□□□□ -0.75
VEGFA-219ENST00000518824 A0A0A6YYH2 397 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 A6NJ64 397 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 NUDT19A8MXV4 375 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 RBBP9O75884 186 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 TUSC2O75896 110 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 GABARAPO95166 117 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 CA2P00918 260 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 APOA2P02652 100 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 CD33P20138 364 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 AADACP22760 399 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 TAS2R20P59543 309 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 FOXE3Q13461 319 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 EIF4EBP1Q13541 118 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 PDLIM3Q53GG5 364 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 OR2B11Q5JQS5 317 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 CXorf66Q5JRM2 361 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 CROCCP3Q8IVE0 287 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 MRPL41Q8IXM3 137 aaKnown RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 COMMD1Q8N668 190 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 RAX2Q96IS3 184 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 MRPS26Q9BYN8 205 aaKnown RBP10.38□□□□□ -0.75
VEGFA-219ENST00000518824 GNB4Q9HAV0 340 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 ZFP57Q9NU63 452 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF580Q9UK33 172 aa10.38□□□□□ -0.75
VEGFA-219ENST00000518824 HPGDSO60760 199 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 IGLV1-40P01703 118 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 ELANEP08246 267 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 CTXN2P0C2S0 81 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 LUMP51884 338 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 KPRPQ5T749 579 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF660Q6AZW8 331 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF695Q8IW36 515 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF645Q8N7E2 425 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 MINDY2Q8NBR6 621 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 MYOZ3Q8TDC0 251 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 S100A16Q96FQ6 103 aaKnown RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 P2RX4Q99571 388 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 TSNAXQ99598 290 aaKnown RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 RNF5Q99942 180 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 RBMX2Q9Y388 322 aaKnown RBP10.37□□□□□ -0.75
VEGFA-219ENST00000518824 NUBP2Q9Y5Y2 271 aa10.37□□□□□ -0.75
VEGFA-219ENST00000518824 DNAH3Q8TD57 4116 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 A0A1W2PN81 502 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 TMEM127O75204 238 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 CRYZL1O95825 349 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 ELK1P19419 428 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 FCGR2CP31995 323 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 CHRNA7P36544 502 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms