RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 hADV38S2A0JD32 116 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 FAM90A26D6RGX4 464 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 E7EQL1 145 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 SIGLEC5O15389 551 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 FGF16O43320 207 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 NDUFA2O43678 99 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 PITX3O75364 302 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 MED6O75586 246 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CLDN1O95832 211 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CGB3P0DN86 165 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CGB7P0DN87 165 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 SSTR5P35346 364 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 KIR2DS2P43631 304 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 GPR12P47775 334 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 ARHGDIBP52566 201 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 AKR1C2P52895 323 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 EDDM3BP56851 147 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 TMEM33P57088 247 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 RPL23AP62750 156 aaKnown RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 CCL8P80075 99 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 MEF2CQ06413 473 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 EIF4EBP1Q13541 118 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 ZNF266Q14584 549 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 ICAM4Q14773 271 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 AANATQ16613 207 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 MORN2Q502X0 79 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 SPRNQ5BIV9 151 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 HSD17B13Q7Z5P4 300 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 EIF4E3Q8N5X7 224 aaKnown RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 TPRX1Q8N7U7 411 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 UBAC2Q8NBM4 344 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 ZNRF1Q8ND25 227 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 DMBX1Q8NFW5 382 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 UBALD1Q8TB05 177 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CA5BP1Q8WTZ4 195 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 GPR146Q96CH1 333 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 SAT2Q96F10 170 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 GAFA1Q96PS6 74 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 RAB40CQ96S21 281 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 LYRM2Q9NU23 88 aaPredicted RBP4.84□□□□□ -1.63
CD47-205ENST00000517766 TMEM106BQ9NUM4 274 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 SDHAF2Q9NX18 166 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 TAS2R3Q9NYW6 316 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CALYQ9NYX4 217 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 IDI2-AS1Q9NZ38 188 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 GNG12Q9UBI6 72 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 CACFD1Q9UGQ2 172 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 MMP24Q9Y5R2 645 aa4.84□□□□□ -1.63
CD47-205ENST00000517766 ARFGEF3Q5TH69 2177 aa4.84□□□□□ -1.64
CD47-205ENST00000517766 AKAP13Q12802 2813 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 IGHV3-43A0A0B4J1X8 118 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 KBTBD11-OT1A0A1B0GTJ5 212 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 KRBOX1C9JBD0 128 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 TMEM178BH3BS89 294 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 I3L521 148 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 TOR1AO14656 332 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 RAB29O14966 203 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 KCNAB3O43448 404 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 NDUFB3O43676 98 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 FSTL3O95633 263 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 IGKV1-39P01597 117 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 GYPAP02724 150 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 TFF1P04155 84 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 IGKV1D-39P04432 117 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 SEC11BP0C7V7 166 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 IGHV3-43DP0DP04 118 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 GCSHP23434 173 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 PPP1CCP36873 323 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 LPAR6P43657 344 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 LOXL3P58215 753 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 TAS2R30P59541 319 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 POLR2GP62487 172 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD47-205ENST00000517766 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 ADORA2A-AS1P86434 159 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 HOXA4Q00056 320 aaPredicted RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 EWSR1Q01844 656 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD47-205ENST00000517766 C17orf58Q2M2W7 97 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 Q3ZCU0 254 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 ZNF585BQ52M93 769 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 RPL7L1Q6DKI1 246 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 SPAG16Q8N0X2 631 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 FGFRL1Q8N441 504 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 TMEM252Q8N6L7 170 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 DEFB108BQ8NET1 73 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 RFESDQ8TAC1 157 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 LINC01560Q8TB33 94 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 PCNPQ8WW12 178 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 TCTEX1D2Q8WW35 142 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 RAB39BQ96DA2 213 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 ADTRPQ96IZ2 230 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 CXorf58Q96LI9 332 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 CCL13Q99616 98 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 SSBP3Q9BWW4 388 aaPredicted RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 PARP12Q9H0J9 701 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 ARV1Q9H2C2 271 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 GAL3ST2Q9H3Q3 398 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms