RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 DRAXINQ8NBI3 349 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 OR1N2Q8NGR9 330 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 FCGR1BQ92637 280 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 CENPOQ9BU64 300 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 GAB2Q9UQC2 676 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 NUBP2Q9Y5Y2 271 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 A0A087WXM4 84 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 TRBV6-7A0A0A0MS04 114 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 I3L521 148 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 M0R1X1 148 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 MFNGO00587 321 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 DIRAS3O95661 229 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 APOA2P02652 100 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 GSTT2P0CG29 244 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 GSTT2BP0CG30 244 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 HIST1H1DP16402 221 aaKnown RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 PSMB9P28065 219 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 FGF9P31371 208 aaPredicted RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 TALDO1P37837 337 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 RPS16P62249 146 aaKnown RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 FHL3Q13643 280 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 ARL6IP1Q15041 203 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 SRSF7Q16629 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 C9orf66Q5T8R8 295 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF562Q6V9R5 426 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 PDPNQ86YL7 162 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF383Q8NA42 475 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 OR11H1Q8NG94 326 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 OR10J5Q8NHC4 309 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 CLCC1Q96S66 551 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 TSNAXQ99598 290 aaKnown RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 CABLES2Q9BTV7 478 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 METTL1Q9UBP6 276 aaKnown RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 FOXA2Q9Y261 457 aaPredicted RBP8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 U3KQK5 164 aa8.22□□□□□ -1.09
PDGFRB-203ENST00000517660 A0A075B6Q4 140 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 A0A0B4J203 849 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 CCDC160A6NGH7 325 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 NOTOA8MTQ0 251 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 SEC14L6B5MCN3 397 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 BET1O15155 118 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 RAMP3O60896 148 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 SPDEFO95238 335 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 OR8U8P0C7N1 319 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 OR8U9P0C7N5 309 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 EGR2P11161 476 aaPredicted RBP8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 LGALS7P47929 136 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 LINC00205P59089 165 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 NDPQ00604 133 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 DCTN2Q13561 401 aaKnown RBP8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 ARFRP1Q13795 201 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 ECSCRQ19T08 205 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 C19orf54Q5BKX5 351 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 IGSF11Q5DX21 431 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 Q6ZS49 121 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 TPRA1Q86W33 373 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 PPP1R27Q86WC6 154 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 NR2C2APQ86WQ0 139 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 ABHD5Q8WTS1 349 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 FLYWCH2Q96CP2 140 aaKnown RBP8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 ATG5Q9H1Y0 275 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 GNB4Q9HAV0 340 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 SLC35D1Q9NTN3 355 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 TXNL4BQ9NX01 149 aaKnown RBP8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 STUB1Q9UNE7 303 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 SSR3Q9UNL2 185 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 FBXO7Q9Y3I1 522 aa8.21□□□□□ -1.1
PDGFRB-203ENST00000517660 A0A1W2PN81 502 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 SOX15O60248 233 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 CHRNA7P36544 502 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 LUMP51884 338 aaPredicted RBP8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF616Q08AN1 781 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 CDNFQ49AH0 187 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 PYHIN1Q6K0P9 492 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF773Q6PK81 442 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 UNQ5815/PRO19632Q6UWF5 114 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 MAFIPQ8WZ33 124 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 OR5B12Q96R08 314 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 TSC22D3Q99576 134 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 GINS4Q9BRT9 223 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 SDHAF2Q9NX18 166 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF230Q9UIE0 474 aaPredicted RBP8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 RBM7Q9Y580 266 aaKnown RBP8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 A3GALT2U3KPV4 340 aa8.2□□□□□ -1.1
PDGFRB-203ENST00000517660 SMIM30A4D0T7 59 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 CA2P00918 260 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 RRASP10301 218 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 DTYMKP23919 212 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 CD40LGP29965 261 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 GNB1P62873 340 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 CBX3Q13185 183 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 FXYD3Q14802 87 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 CNPY1Q3B7I2 92 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms