RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 WFDC10AQ9H1F0 79 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 POMPQ9Y244 141 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR51B2Q9Y5P1 312 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 SOGA1O94964 1423 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 TRAV12-1A0A0B4J245 112 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 SYCE3A1L190 88 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 TIMM8AO60220 97 aaPredicted RBP-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 PTBP3O95758 552 aaKnown RBP-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 HLA-HP01893 362 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 TFPTP0C1Z6 253 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 CALCBP10092 127 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 ATP6V0CP27449 155 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 SSR2P43308 183 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 CBX1P83916 185 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 RHOGP84095 191 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 RPA4Q13156 261 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 XRCC4Q13426 336 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 SPAG11AQ6PDA7 123 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 TMCO5AQ8N6Q1 288 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 SPATA4Q8NEY3 305 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 RLN3Q8WXF3 142 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 ING5Q8WYH8 240 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 CCDC47Q96A33 483 aaKnown RBP-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 GALMQ96C23 342 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 C14orf105Q9NVL8 296 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 POLR1DQ9Y2S0 133 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 CMYA5Q8N3K9 4069 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 LRRK2Q5S007 2527 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 KIF16BQ96L93 1317 aa-3.46□□□□□ -2.96
RNU6-539P-201ENST00000516665 LINC00862A6NCI5 91 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR6C6A6NF89 314 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 SMCO2A6NFE2 343 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 MT1AP04731 61 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR13C7P0DN81 318 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 HTD2P86397 168 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 PDZK1IP1Q13113 114 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 TFDP2Q14188 446 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 GLT8D1Q68CQ7 371 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 RWDD4Q6NW29 188 aaKnown RBP-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 FAHD1Q6P587 224 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 C11orf88Q6PI97 169 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 VKORC1L1Q8N0U8 176 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 C4orf3Q8WVX3 66 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 SCGB3A2Q96PL1 93 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 BLZF1Q9H2G9 400 aa-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 TBL2Q9Y4P3 447 aaKnown RBP-3.47□□□□□ -2.96
RNU6-539P-201ENST00000516665 SPAG9O60271 1321 aaKnown RBP-3.47□□□□□ -2.97
RNU6-539P-201ENST00000516665 CCDC168Q8NDH2 2452 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 USP47Q96K76 1375 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 USF3Q68DE3 2245 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 TRAV23DV6A0A075B6W5 121 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 A0A1B0GXF2 115 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 ACOX3O15254 700 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 FBP1P09467 338 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 SLC1A1P43005 524 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 RAB2AP61019 212 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 GNA12Q03113 381 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 ANKDD1AQ495B1 522 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 GLYATL3Q5SZD4 288 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 NDUFAF7Q7L592 441 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 LYPD6BQ8NI32 183 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 ACOT12Q8WYK0 555 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 RMND5BQ96G75 393 aaPredicted RBP-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 TRNT1Q96Q11 434 aaKnown RBP-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 ATP6V0BQ99437 205 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 CHP1Q99653 195 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 SHCBP1LQ9BZQ2 653 aa-3.48□□□□□ -2.97
RNU6-539P-201ENST00000516665 TRIM64CA6NLI5 447 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 SNTNA6NMZ2 147 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 HMGB1P1B2RPK0 211 aaPredicted RBP-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 F8WDY8 70 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 H7C0C1 242 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 AIM2O14862 343 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 MYO1DO94832 1006 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 TSPAN12O95859 305 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 PTTG1O95997 202 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 MIFP14174 115 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 ATP5OP48047 213 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 MAPK14Q16539 360 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 DEFB113Q30KQ7 82 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 CEP55Q53EZ4 464 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 PACRGLQ8N7B6 248 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 DAND5Q8N907 189 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 CCL4L1Q8NHW4 92 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 RILPQ96NA2 401 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 C15orf41Q9Y2V0 281 aa-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 POLR3HQ9Y535 204 aaPredicted RBP-3.49□□□□□ -2.97
RNU6-539P-201ENST00000516665 OBSL1O75147 1896 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 TRAV26-1A0A087WT03 109 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 B4DEV8 164 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 SGCEO43556 437 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 SCGB2A1O75556 95 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 KLK1P06870 262 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 CTSDP07339 412 aaPredicted RBP-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 PSMA1P25786 263 aaKnown RBP-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 FXYD2P54710 66 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 RAB25P57735 213 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 LCN15Q6UWW0 184 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 AAED1Q7RTV5 226 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 FBXO36Q8NEA4 188 aa-3.5□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms