RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 RRASP10301 218 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 FXYD4P59646 89 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 CBX3Q13185 183 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 HNF4GQ14541 408 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 MEF2DQ14814 521 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 FBLN7Q53RD9 439 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 PYDC2Q56P42 97 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 STEAP1BQ6NZ63 245 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 LPCAT3Q6P1A2 487 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 Q6ZSV7 163 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 Q8N2B8 174 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 ZNF383Q8NA42 475 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 DRAXINQ8NBI3 349 aaPredicted RBP9.5□□□□□ -0.89
SNF8-215ENST00000515572 SECTM1Q8WVN6 248 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 HSD17B10Q99714 261 aaKnown RBP9.5□□□□□ -0.89
SNF8-215ENST00000515572 MDFIQ99750 246 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 RNF5Q99942 180 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 SLC5A7Q9GZV3 580 aa9.5□□□□□ -0.89
SNF8-215ENST00000515572 CLPSL1A2RUU4 121 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 M0QYG6 137 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 RAB3DO95716 219 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 IGLV2-14P01704 120 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 DUTP33316 252 aaKnown RBP9.49□□□□□ -0.89
SNF8-215ENST00000515572 ZNF45Q02386 682 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 ZNF79Q15937 498 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 RTL8BQ17RB0 113 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 GLDNQ6ZMI3 551 aaPredicted RBP9.49□□□□□ -0.89
SNF8-215ENST00000515572 ZNF66Q6ZN08 573 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 Q8N402 240 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 OR2T6Q8NHC8 308 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 C5orf30Q96GV9 206 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 THAP7Q9BT49 309 aaPredicted RBP9.49□□□□□ -0.89
SNF8-215ENST00000515572 SLC35D1Q9NTN3 355 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 PTTG2Q9NZH5 202 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 PRELID3BQ9Y3B1 194 aa9.49□□□□□ -0.89
SNF8-215ENST00000515572 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
SNF8-215ENST00000515572 AKAIN1P0CW23 69 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 UCP3P55916 312 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 AP3S2P59780 193 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
SNF8-215ENST00000515572 MMDQ15546 238 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 AWAT1Q58HT5 328 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 KCTD9Q7L273 389 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 CMTM1Q8IZ96 169 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 BVESQ8NE79 360 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 NPBQ8NG41 125 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 LINC01006Q8NI28 216 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 DEDD2Q8WXF8 326 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 DDB2Q92466 427 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 FLYWCH2Q96CP2 140 aaKnown RBP9.48□□□□□ -0.89
SNF8-215ENST00000515572 TINAGL1Q9GZM7 467 aaPredicted RBP9.48□□□□□ -0.89
SNF8-215ENST00000515572 SRRQ9GZT4 340 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 ZNF702PQ9H963 129 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 CCL28Q9NRJ3 127 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 PLSCR3Q9NRY6 295 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
SNF8-215ENST00000515572 KIAA1456Q9P272 454 aa9.48□□□□□ -0.89
SNF8-215ENST00000515572 LINC00473A8K010 186 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 DISC1C4P0D8 188 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 NBR2O15453 112 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 AMY1AP04745 511 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 AMY2AP04746 511 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 MDKP21741 143 aaPredicted RBP9.47□□□□□ -0.89
SNF8-215ENST00000515572 S100GP29377 79 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 GNRHRP30968 328 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 FAUP35544 74 aaKnown RBP9.47□□□□□ -0.89
SNF8-215ENST00000515572 LGALS7P47929 136 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 LINC00205P59089 165 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 BLCAPP62952 87 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 CATR1Q13166 79 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 ABCA11PQ4W5N1 156 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
SNF8-215ENST00000515572 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 FAM71E2Q8N5Q1 922 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 GDPD1Q8N9F7 314 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 Q8N9W7 124 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNF8-215ENST00000515572 TRIM63Q969Q1 353 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
SNF8-215ENST00000515572 RASL11BQ9BPW5 248 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 FXYD6Q9H0Q3 95 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 RNF114Q9Y508 228 aa9.47□□□□□ -0.89
SNF8-215ENST00000515572 COL6A5A8TX70 2615 aa9.46□□□□□ -0.89
SNF8-215ENST00000515572 GPR31O00270 319 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 NDUFA3O95167 84 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 SPDEFO95238 335 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 IGKV1-16P04430 117 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 ECI1P42126 302 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 KIR2DS2P43631 304 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 F2RL1P55085 397 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 AADACL3Q5VUY0 350 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 MFSD4AQ8N468 514 aa9.46□□□□□ -0.9
SNF8-215ENST00000515572 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms