RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
VCAN-211ENST00000513984 KRASP01116 189 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 PPOXP50336 477 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 LINC00205P59089 165 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 RPL23AP62750 156 aaKnown RBP12.32□□□□□ -0.44
VCAN-211ENST00000513984 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
VCAN-211ENST00000513984 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 OR1S2Q8NGQ3 325 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 GAL3ST2Q9H3Q3 398 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 TXNL1O43396 289 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 NDUFB3O43676 98 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 NDUFA2O43678 99 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 FBXO24O75426 580 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 MMP23AO75900 390 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 IGHV3-7P01780 117 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 SEC11BP0C7V7 166 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 TAS2R30P59541 319 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 ZNF266Q14584 549 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 ZNF273Q14593 569 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 HFEQ30201 348 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 C4orf17Q53FE4 359 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 LYPD2Q6UXB3 125 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 DDB2Q92466 427 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 HSPB7Q9UBY9 170 aa12.31□□□□□ -0.44
VCAN-211ENST00000513984 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
VCAN-211ENST00000513984 ZNF705EA8MWA4 302 aaPredicted RBP12.3□□□□□ -0.44
VCAN-211ENST00000513984 FSTL3O95633 263 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 HPRT1P00492 218 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 SPP1P10451 314 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 NFYBP25208 207 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 PRAMEF5Q5TYX0 476 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 ZNF251Q9BRH9 671 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 MARCH11A6NNE9 402 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 FCGR3BO75015 233 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 CST7O76096 145 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
VCAN-211ENST00000513984 ZP3P21754 424 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 DYNLT3P51808 116 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 CLINT1Q14677 625 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 HEPN1Q6WQI6 88 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 C1orf229Q6ZS94 237 aaPredicted RBP12.3□□□□□ -0.44
VCAN-211ENST00000513984 SLC25A48Q6ZT89 311 aaKnown RBP12.3□□□□□ -0.44
VCAN-211ENST00000513984 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 STX12Q86Y82 276 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 OR5C1Q8NGR4 320 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 ZNF714Q96N38 554 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.3□□□□□ -0.44
VCAN-211ENST00000513984 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
VCAN-211ENST00000513984 TET2Q6N021 2002 aaPredicted RBP12.29□□□□□ -0.44
VCAN-211ENST00000513984 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 DVL1O14640 695 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 MED6O75586 246 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 DAOP14920 347 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 AGAP20933 346 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 SULT1A1P50225 295 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 UBE2KP61086 200 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 TMEM200BQ69YZ2 307 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 PSENENQ9NZ42 101 aa12.29□□□□□ -0.44
VCAN-211ENST00000513984 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 KRBOX1C9JBD0 128 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 H3BP45 60 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 IAPPP10997 89 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 THBS3P49746 956 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 ARHGDIBP52566 201 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 MRPS11P82912 194 aaKnown RBP12.28□□□□□ -0.44
VCAN-211ENST00000513984 STPG2Q8N412 459 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 MARC2Q969Z3 335 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 ADTRPQ96IZ2 230 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 S1PR3Q99500 378 aa12.28□□□□□ -0.44
VCAN-211ENST00000513984 SHOXO15266 292 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 ZG16O60844 167 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 UQCRFS1P47985 274 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 GNG10P50151 68 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 BLOC1S1P78537 153 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 AARDQ4LEZ3 155 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 LYG1Q8N1E2 194 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 TMEM217Q8N7C4 229 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 HSD17B11Q8NBQ5 300 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 ITLN2Q8WWU7 325 aaPredicted RBP12.27□□□□□ -0.44
VCAN-211ENST00000513984 H1FXQ92522 213 aaKnown RBP12.27□□□□□ -0.44
VCAN-211ENST00000513984 LINC00052Q96N35 136 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 ATP5SQ99766 215 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 RBKSQ9H477 322 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 PARP11Q9NR21 331 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 CBLN4Q9NTU7 201 aa12.27□□□□□ -0.44
VCAN-211ENST00000513984 DANCRP0C864 163 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms