RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 GSTT2P0CG29 244 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 GSTT2BP0CG30 244 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 RRASP10301 218 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 CD24P25063 80 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 BLCAPP62952 87 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 C2orf68Q2NKX9 166 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 ABCA11PQ4W5N1 156 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 FAM53AQ6NSI3 398 aaPredicted RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 HOGA1Q86XE5 327 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 PDPNQ86YL7 162 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 FOXRED2Q8IWF2 684 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 FAM71E2Q8N5Q1 922 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 KLHDC1Q8N7A1 406 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 BEST4Q8NFU0 473 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 WIPF2Q8TF74 440 aaPredicted RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 CHPT1Q8WUD6 406 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 NUDCD2Q8WVJ2 157 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 BORCS5Q969J3 196 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 RNF125Q96EQ8 232 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 MRPL20Q9BYC9 149 aaKnown RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 SCPEP1Q9HB40 452 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 CCDC59Q9P031 241 aaKnown RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 KIAA1456Q9P272 454 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 RABL2AQ9UBK7 228 aaPredicted RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF230Q9UIE0 474 aaPredicted RBP6.51□□□□□ -1.37
NEDD4-210ENST00000513957 ANAPC10Q9UM13 185 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 RABL2BQ9UNT1 228 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 WASHC3Q9Y3C0 194 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 OR2W1Q9Y3N9 320 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 H0YJW9 148 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 AP4M1O00189 453 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 NBR2O15453 112 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 SSX5O60225 188 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 NDUFA3O95167 84 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 CT45A6P0DMU7 189 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 CT45A5P0DMU8 189 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 CT45A7P0DMV0 189 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 OR5H8P0DN80 308 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 PRSS3P35030 304 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 OR3A3P47888 321 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 LUMP51884 338 aaPredicted RBP6.5□□□□□ -1.37
NEDD4-210ENST00000513957 TAS2R46P59540 309 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 TAS2R20P59543 309 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 ARPC4P59998 168 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 CBX3Q13185 183 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 MMDQ15546 238 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 CLVS1Q8IUQ0 354 aaPredicted RBP6.5□□□□□ -1.37
NEDD4-210ENST00000513957 COMMD1Q8N668 190 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF645Q8N7E2 425 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 Q8N9W7 124 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 NPBQ8NG41 125 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
NEDD4-210ENST00000513957 RAB24Q969Q5 203 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 ABHD14BQ96IU4 210 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 RASL11BQ9BPW5 248 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 ST6GALNAC5Q9BVH7 336 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 NAA50Q9GZZ1 169 aaKnown RBP6.5□□□□□ -1.37
NEDD4-210ENST00000513957 OR2D2Q9H210 308 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 IFT46Q9NQC8 304 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 NECAP2Q9NVZ3 263 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 COMMD3Q9UBI1 195 aa6.5□□□□□ -1.37
NEDD4-210ENST00000513957 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
NEDD4-210ENST00000513957 IGHV3-72A0A0B4J1Y9 119 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 NCBP2LA6PVI3 153 aaKnown RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF701M0R085 212 aaPredicted RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 HLA-DRB1P01911 266 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 HLA-DQB1P01920 261 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OPN1MWP04001 364 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 EIF4EP06730 217 aaKnown RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OR8U9P0C7N5 309 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OPN1MW2P0DN77 364 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OPN1MW3P0DN78 364 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 VSIG10L2P0DP72 767 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 SLC6A1P30531 599 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 LGALS7P47929 136 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 THBS3P49746 956 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 ACTBP60709 375 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 SLC35B1P78383 322 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 MRPS10P82664 201 aaKnown RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 RTL8BQ17RB0 113 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 RPL39P5Q59GN2 51 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 C19orf54Q5BKX5 351 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 SLC35E3Q7Z769 313 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 NDUFA11Q86Y39 141 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OR5AP2Q8NGF4 316 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OR4X2Q8NGF9 303 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 OR8U1Q8NH10 309 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 TSNAXQ99598 290 aaKnown RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 PARP12Q9H0J9 701 aaKnown RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 MMP27Q9H306 513 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 PLSCR3Q9NRY6 295 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 SDHAF2Q9NX18 166 aa6.49□□□□□ -1.37
NEDD4-210ENST00000513957 ELF5Q9UKW6 265 aaPredicted RBP6.49□□□□□ -1.37
NEDD4-210ENST00000513957 IGKV1D-8A0A087WSZ0 117 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF736B4DX44 427 aaPredicted RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 H3BS24 57 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 H7C2Y5 167 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms