RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 SLC38A6Q8IZM9 456 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 C12orf45Q8N5I9 185 aaPredicted RBP3.68□□□□□ -1.82
CLDND1-228ENST00000513873 SPICQ8N5J4 248 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 OR10AD1Q8NGE0 317 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 OR4A4PQ8NGN8 299 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 OR10J5Q8NHC4 309 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF431Q8TF32 576 aaPredicted RBP3.68□□□□□ -1.82
CLDND1-228ENST00000513873 MRPL24Q96A35 216 aaKnown RBP3.68□□□□□ -1.82
CLDND1-228ENST00000513873 RAB39BQ96DA2 213 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 C14orf79Q96F83 325 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 PIK3IP1Q96FE7 263 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 C17orf77Q96MU5 243 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 NRIP2Q9BQI9 281 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 NICN1Q9BSH3 213 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 FAAP24Q9BTP7 215 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 PDCD10Q9BUL8 212 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 TLNRD1Q9H1K6 362 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 GHITMQ9H3K2 345 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 DYNLRB1Q9NP97 96 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 CA10Q9NS85 328 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 C1orf123Q9NWV4 160 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 MTCH1Q9NZJ7 389 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 CACFD1Q9UGQ2 172 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 OPN4Q9UHM6 478 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 AK3Q9UIJ7 227 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 TRAPPC2LQ9UL33 140 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
CLDND1-228ENST00000513873 MEGF8Q7Z7M0 2845 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 TRAV38-1A0A0B4J264 116 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 A0A0B4J2A0 478 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 IGKV1-12A0A0C4DH73 117 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 TEX13DA0A0J9YY54 714 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NKX6-3A6NJ46 265 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 CEACAM18A8MTB9 384 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ABCD4O14678 606 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 FABP7O15540 132 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NDUFA2O43678 99 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SYNGR1O43759 233 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SSX4O60224 188 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SSX5O60225 188 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ZG16O60844 167 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 DUS4LO95620 317 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 PTBP3O95758 552 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 HAND1O96004 215 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 IGKV1D-12P01611 117 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 HLA-AP01891 365 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 C1QBP02746 253 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 CTSDP07339 412 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 GIPP09681 153 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 OR4A8P0C604 315 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF728P0DKX0 622 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SULT1A3P0DMM9 295 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SULT1A4P0DMN0 295 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 PTHLHP12272 177 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 MUC1P15941 1255 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 AKR1C4P17516 323 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ZBTB25P24278 435 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 BTCP35070 178 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 MPV17P39210 176 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NPBWR2P48146 333 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 DHODHQ02127 395 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SMCO1Q147U7 214 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 MICBQ29980 383 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 PIGYQ3MUY2 71 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 PRR30Q53SZ7 412 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 OR52W1Q6IF63 320 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 KCTD9Q7L273 389 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 LYG2Q86SG7 212 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 BIVMQ86UB2 503 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 DRAXINQ8NBI3 349 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SUMF2Q8NBJ7 301 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 UXS1Q8NBZ7 420 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 RELL2Q8NC24 303 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 TMEM185AQ8NFB2 350 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 OR4S1Q8NGB4 309 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 OR5T2Q8NGG2 359 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 GALMQ96C23 342 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NKX3-1Q99801 234 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SLC6A7Q99884 636 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SULT4A1Q9BR01 284 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF2Q9BSG1 426 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SUCNR1Q9BXA5 334 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 ZNF436Q9C0F3 470 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 KCNK15Q9H427 330 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NCOR1P1Q9H4R4 102 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 Q9N2K0 584 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 RAB18Q9NP72 206 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SHPKQ9UHJ6 478 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 PAIP2BQ9ULR5 123 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 GAB2Q9UQC2 676 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 RNF115Q9Y4L5 304 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 RBM7Q9Y580 266 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 SONP18583 2426 aaKnown RBP3.67□□□□□ -1.82
CLDND1-228ENST00000513873 HIVEP2P31629 2446 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 EXPH5Q8NEV8 1989 aa3.67□□□□□ -1.82
CLDND1-228ENST00000513873 NBEAL2Q6ZNJ1 2754 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms