RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 IGKV1-13P0DP09 117 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 NAT1P18440 290 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 SLC6A1P30531 599 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 DUTP33316 252 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 CDX1P47902 265 aaPredicted RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 BRWD1-AS2P59051 145 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 RPL23AP62750 156 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 CX3CL1P78423 397 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 TAGLNQ01995 201 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 FOXE3Q13461 319 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 PSG5Q15238 335 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 NSUN5P1Q3KNT7 163 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 TMEM177Q53S58 311 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 UBE2NLQ5JXB2 153 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 ZNF660Q6AZW8 331 aaPredicted RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 TEX38Q6PEX7 206 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 ZNF562Q6V9R5 426 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 ETV3LQ6ZN32 361 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 GVQW1Q8N7I0 195 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 SNAPC3Q92966 411 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 R3HDM4Q96D70 268 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 S100A16Q96FQ6 103 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 GON7Q9BXV9 100 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 MRPS26Q9BYN8 205 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 OR2D2Q9H210 308 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 DIABLOQ9NR28 239 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 FBXO7Q9Y3I1 522 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 LINC00473A8K010 186 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 M0R1X1 148 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 APOA1P02647 267 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 PTHLHP12272 177 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 LGALS7P47929 136 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 GNG2P59768 71 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 SLC35B1P78383 322 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 MSMO1Q15800 293 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 DHRS11Q6UWP2 260 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 C18orf65Q6ZTR6 163 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 OVCH2Q7RTZ1 564 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 BEST4Q8NFU0 473 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 GIMAP1Q8WWP7 306 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 ACOT12Q8WYK0 555 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 FLYWCH2Q96CP2 140 aaKnown RBP7.59□□□□□ -1.19
RNF4-221ENST00000513643 P2RX4Q99571 388 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 GINS4Q9BRT9 223 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 FBXL15Q9H469 300 aa7.59□□□□□ -1.19
RNF4-221ENST00000513643 G3V318 75 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 G3V4G9 280 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 WIPF1O43516 503 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 SOX15O60248 233 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 SLC22A5O76082 557 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 TPPPO94811 219 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 RPLP1P05386 114 aaKnown RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 EIF4EP06730 217 aaKnown RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 NFYAP23511 347 aaPredicted RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 CBX5P45973 191 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 THBS3P49746 956 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 RORCP51449 518 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 LUMP51884 338 aaPredicted RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 TAS2R20P59543 309 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 GPR107Q5VW38 600 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 LYSMD2Q8IV50 215 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 ZNF645Q8N7E2 425 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 SAMD12Q8N8I0 201 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 ADTRPQ96IZ2 230 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 TSNAXQ99598 290 aaKnown RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 SLC35D1Q9NTN3 355 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 KIAA1456Q9P272 454 aa7.58□□□□□ -1.2
RNF4-221ENST00000513643 RBMX2Q9Y388 322 aaKnown RBP7.58□□□□□ -1.2
RNF4-221ENST00000513643 A0A1W2PRX2 142 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 H7C2Y5 167 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 ARPC1BO15143 372 aaKnown RBP7.57□□□□□ -1.2
RNF4-221ENST00000513643 BRI3O95415 125 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 APOA2P02652 100 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 OR5H8P0DN80 308 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 RRASP10301 218 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 ELK1P19419 428 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 RPL30P62888 115 aaKnown RBP7.57□□□□□ -1.2
RNF4-221ENST00000513643 RUNX1Q01196 453 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 DEFA6Q01524 100 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 AKIRIN2Q53H80 203 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 ZNF695Q8IW36 515 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 MRPL41Q8IXM3 137 aaKnown RBP7.57□□□□□ -1.2
RNF4-221ENST00000513643 BVESQ8NE79 360 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 OR5AP2Q8NGF4 316 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 GPX8Q8TED1 209 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 KLK15Q9H2R5 256 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
RNF4-221ENST00000513643 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
RNF4-221ENST00000513643 TRAV41A0A0B4J266 112 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 I3L521 148 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 PPYP01298 95 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 ZNF182P17025 639 aaPredicted RBP7.56□□□□□ -1.2
RNF4-221ENST00000513643 VDAC1P21796 283 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 AADACP22760 399 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 FCGR2CP31995 323 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 MYCNOSP40205 109 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms