RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
DDX41-213ENST00000512027 PSMB8P28062 276 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 PPIFP30405 207 aaKnown RBP12.88□□□□□ -0.35
DDX41-213ENST00000512027 RPS16P62249 146 aaKnown RBP12.88□□□□□ -0.35
DDX41-213ENST00000512027 CX3CL1P78423 397 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
DDX41-213ENST00000512027 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 SLC25A17O43808 307 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 SOX15O60248 233 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 RBBP9O75884 186 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 DIRAS3O95661 229 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 CA2P00918 260 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
DDX41-213ENST00000512027 RAB25P57735 213 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 SRSF7Q16629 238 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDX41-213ENST00000512027 TIMM50Q3ZCQ8 353 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 GVQW1Q8N7I0 195 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 P2RX4Q99571 388 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 GNB4Q9HAV0 340 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 AURKAIP1Q9NWT8 199 aaPredicted RBP12.87□□□□□ -0.35
DDX41-213ENST00000512027 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
DDX41-213ENST00000512027 LINC00473A8K010 186 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 SCGNO76038 276 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 EGR2P11161 476 aaPredicted RBP12.86□□□□□ -0.35
DDX41-213ENST00000512027 HOXD3P31249 432 aaPredicted RBP12.86□□□□□ -0.35
DDX41-213ENST00000512027 MYCNOSP40205 109 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
DDX41-213ENST00000512027 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 PDPNQ86YL7 162 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 BVESQ8NE79 360 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
DDX41-213ENST00000512027 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 A0A1W2PN81 502 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 TRIM64CA6NLI5 447 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 CCL24O00175 119 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 IGLV1-40P01703 118 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 OR5H8P0DN80 308 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 CHRNA7P36544 502 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 SCAND1P57086 179 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 NCS1P62166 190 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 PJVKQ0ZLH3 352 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
DDX41-213ENST00000512027 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 FLYWCH2Q96CP2 140 aaKnown RBP12.85□□□□□ -0.35
DDX41-213ENST00000512027 RCC1LQ96I51 464 aaKnown RBP12.85□□□□□ -0.35
DDX41-213ENST00000512027 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
DDX41-213ENST00000512027 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
DDX41-213ENST00000512027 SMIM18P0DKX4 95 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 DUTP33316 252 aaKnown RBP12.84□□□□□ -0.35
DDX41-213ENST00000512027 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 SSBP2P81877 361 aaPredicted RBP12.84□□□□□ -0.35
DDX41-213ENST00000512027 PITPNAQ00169 270 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 ZNF660Q6AZW8 331 aaPredicted RBP12.84□□□□□ -0.35
DDX41-213ENST00000512027 CNIH2Q6PI25 160 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 MINDY2Q8NBR6 621 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 RNF5Q99942 180 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
DDX41-213ENST00000512027 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 SPDEFO95238 335 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 SLC6A1P30531 599 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 VBP1P61758 197 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 GNB1P62873 340 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 OR2B11Q5JQS5 317 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 UNQ5815/PRO19632Q6UWF5 114 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 PPP1R27Q86WC6 154 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 LFNGQ8NES3 379 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 BEST4Q8NFU0 473 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 GRPEL2Q8TAA5 225 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 DDB2Q92466 427 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 NAA50Q9GZZ1 169 aaKnown RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
DDX41-213ENST00000512027 OR2W1Q9Y3N9 320 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 NUBP2Q9Y5Y2 271 aa12.83□□□□□ -0.36
DDX41-213ENST00000512027 SHOXO15266 292 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 CRYZL1O95825 349 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 CRYGBP07316 175 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 RAB9AP51151 201 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 RPL30P62888 115 aaKnown RBP12.82□□□□□ -0.36
DDX41-213ENST00000512027 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms