RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 USE1Q9NZ43 259 aa2.36□□□□□ -2.03
CHD1-206ENST00000511067 PCYT1BQ9Y5K3 369 aaPredicted RBP2.36□□□□□ -2.03
CHD1-206ENST00000511067 SLIT2O94813 1529 aa2.36□□□□□ -2.03
CHD1-206ENST00000511067 TMEM235A6NFC5 223 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 M0R381 172 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 NDUFB2O95178 105 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 APOEP02649 317 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 CDC34P49427 236 aaPredicted RBP2.35□□□□□ -2.03
CHD1-206ENST00000511067 HOXC5Q00444 222 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 N4BP2L1Q5TBK1 243 aaPredicted RBP2.35□□□□□ -2.03
CHD1-206ENST00000511067 SLC2A9Q9NRM0 540 aa2.35□□□□□ -2.03
CHD1-206ENST00000511067 MDC1Q14676 2089 aaKnown RBP2.34□□□□□ -2.03
CHD1-206ENST00000511067 IGHV3-15A0A0B4J1V0 119 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 MUC21A0A140T8X8 626 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 PFDN6O15212 129 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 SLC16A4O15374 487 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 TRAPPC3O43617 180 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 ZNF189O75820 626 aaPredicted RBP2.34□□□□□ -2.03
CHD1-206ENST00000511067 COX5BP10606 129 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 TMEM33P57088 247 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 HLA-DRB3P79483 266 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.34□□□□□ -2.03
CHD1-206ENST00000511067 CST9Q5W186 159 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 Q8NDZ9 215 aa2.34□□□□□ -2.03
CHD1-206ENST00000511067 ZNF471Q9BX82 626 aaPredicted RBP2.34□□□□□ -2.03
CHD1-206ENST00000511067 KLK5Q9Y337 293 aaPredicted RBP2.34□□□□□ -2.03
CHD1-206ENST00000511067 KIF21BO75037 1637 aa2.34□□□□□ -2.04
CHD1-206ENST00000511067 ABCC11Q96J66 1382 aa2.34□□□□□ -2.04
CHD1-206ENST00000511067 POLR1AO95602 1720 aaPredicted RBP2.34□□□□□ -2.04
CHD1-206ENST00000511067 VIRMAQ69YN4 1812 aaKnown RBP2.33□□□□□ -2.04
CHD1-206ENST00000511067 SMARCA2P51531 1590 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 VPS37CA5D8V6 355 aaPredicted RBP2.33□□□□□ -2.04
CHD1-206ENST00000511067 OR5K4A6NMS3 321 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 DEXIO95424 95 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 IGHV1-69P01742 117 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 HLA-DRAP01903 254 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 IL3P08700 152 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 CD36P16671 472 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 MLLT11Q13015 90 aaPredicted RBP2.33□□□□□ -2.04
CHD1-206ENST00000511067 NAA40Q86UY6 237 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 BAP18Q8IXM2 172 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 C1orf174Q8IYL3 243 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 LRRC34Q8IZ02 419 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 JOSD2Q8TAC2 188 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 CXCL16Q9H2A7 254 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 POLR1DQ9Y2S0 133 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 CEP162Q5TB80 1403 aa2.33□□□□□ -2.04
CHD1-206ENST00000511067 MAPKBP1O60336 1514 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 ABCC8Q09428 1581 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 KIAA2026Q5HYC2 2103 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 STRCP1A6NGW2 1772 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 A0A1W2PQL4 384 aaPredicted RBP2.32□□□□□ -2.04
CHD1-206ENST00000511067 OR11H12B2RN74 326 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 TYMSP04818 313 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 JOSD1Q15040 202 aaPredicted RBP2.32□□□□□ -2.04
CHD1-206ENST00000511067 SS18Q15532 418 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 UAP1Q16222 522 aaPredicted RBP2.32□□□□□ -2.04
CHD1-206ENST00000511067 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 OR11H2Q8NH07 326 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 Q9BRP9 147 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 TMEM106BQ9NUM4 274 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 NCKAP5O14513 1909 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 PLCH2O75038 1416 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 NCAPD3P42695 1498 aa2.32□□□□□ -2.04
CHD1-206ENST00000511067 COL4A2P08572 1712 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 OR6C6A6NF89 314 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 UBE2L6O14933 153 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 CD24P25063 80 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 SERPINB10P48595 397 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 PPP1R1AQ13522 171 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 OGFRL1Q5TC84 451 aaPredicted RBP2.31□□□□□ -2.04
CHD1-206ENST00000511067 LGALS9CQ6DKI2 356 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 IQCF2Q8IXL9 164 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 CNEP1R1Q8N9A8 125 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 PIGXQ8TBF5 258 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 HAVCR2Q8TDQ0 301 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 ANKRD36BP1Q96IX9 119 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 TMEM109Q9BVC6 243 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 MAP1LC3AQ9H492 121 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 NOSIPQ9Y314 301 aaKnown RBP2.31□□□□□ -2.04
CHD1-206ENST00000511067 FAM215AQ9Y5M1 114 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 SYNJ1O43426 1573 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 ABCA5Q8WWZ7 1642 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 WIZO95785 1651 aa2.31□□□□□ -2.04
CHD1-206ENST00000511067 FBN1P35555 2871 aaKnown RBP2.3□□□□□ -2.04
CHD1-206ENST00000511067 M0QZ92 97 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 GNRH2O43555 120 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 XCL1P47992 114 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 TMEM31Q5JXX7 168 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 LRRN1Q6UXK5 716 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 EEF1AKMT1Q8WVE0 214 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 PECRQ9BY49 303 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 TTTY12Q9BZ98 90 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 TMEM222Q9H0R3 208 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 FGFR1OP2Q9NVK5 253 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms