RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GNG10P50151 68 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 APOFQ13790 326 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 GUCA2BQ16661 112 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 LINC00242Q5T6M2 205 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 C1orf134Q5TEV5 83 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 Q5VSD8 79 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 PLCXD3Q63HM9 321 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 ASRGL1Q7L266 308 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 OFCC1Q8IZS5 231 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 YIPF7Q8N8F6 280 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 OR10A6Q8NH74 314 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 RNF133Q8WVZ7 376 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 EMG1Q92979 244 aaKnown RBP4.22□□□□□ -1.73
USP53-206ENST00000510737 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
USP53-206ENST00000510737 SPACA5Q96QH8 159 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 MBOAT4Q96T53 435 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 FEVQ99581 238 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 MFFQ9GZY8 342 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 KLK11Q9UBX7 282 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 ENPP5Q9UJA9 477 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 COPS3Q9UNS2 423 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 NUBP2Q9Y5Y2 271 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 LRP1Q07954 4544 aaKnown RBP4.21□□□□□ -1.74
USP53-206ENST00000510737 ODAMA1E959 279 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 TRPC5OSA6NMA1 111 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 NRASP01111 189 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 HTR1FP30939 366 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 RIPPLY1Q0D2K3 151 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 IL24Q13007 206 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 STX3Q13277 289 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 CYLC2Q14093 348 aaPredicted RBP4.21□□□□□ -1.74
USP53-206ENST00000510737 LTC4SQ16873 150 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 ECSCRQ19T08 205 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 VWC2Q2TAL6 325 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 SOHLH1Q5JUK2 328 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 SLX4IPQ5VYV7 408 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 LYPD1Q8N2G4 141 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 EIF1ADQ8N9N8 165 aaKnown RBP4.21□□□□□ -1.74
USP53-206ENST00000510737 PROKR2Q8NFJ6 384 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 OR8B12Q8NGG6 310 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 UBALD1Q8TB05 177 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 FAM81AQ8TBF8 368 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 COQ2Q96H96 371 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 CEP19Q96LK0 163 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 OSBPL10Q9BXB5 764 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 ANKRD60Q9BZ19 345 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 NIPAL2Q9H841 368 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 CNOT2Q9NZN8 540 aaKnown RBP4.21□□□□□ -1.74
USP53-206ENST00000510737 CCDC167Q9P0B6 97 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 CD300AQ9UGN4 299 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 FOXA2Q9Y261 457 aaPredicted RBP4.21□□□□□ -1.74
USP53-206ENST00000510737 MUC2Q02817 5179 aa4.21□□□□□ -1.74
USP53-206ENST00000510737 A6NIN4 97 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 ZNF729A6NN14 1252 aaPredicted RBP4.2□□□□□ -1.74
USP53-206ENST00000510737 SIRPB1O00241 398 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 UBE2CO00762 179 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 DEFB4AO15263 64 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 BIRC5O15392 142 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TRBV12-3P01733 135 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 HLA-DRB1P01911 266 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 FMO3P31513 532 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 IFNA8P32881 189 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 MRPL19P49406 292 aaKnown RBP4.2□□□□□ -1.74
USP53-206ENST00000510737 TPPP2P59282 170 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 SELENOWP63302 87 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 LRRC36Q1X8D7 754 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 CYBRD1Q53TN4 286 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 ZNF684Q5T5D7 378 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TMEM42Q69YG0 159 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 PVRIGQ6DKI7 326 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TMUB2Q71RG4 321 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TRPM8Q7Z2W7 1104 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 FAM86B1Q8N7N1 296 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 OR10X1Q8NGY0 326 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 OR2T4Q8NH00 348 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 RFESDQ8TAC1 157 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 RTN4IP1Q8WWV3 396 aaPredicted RBP4.2□□□□□ -1.74
USP53-206ENST00000510737 PHYHIPLQ96FC7 376 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TPD52L3Q96J77 140 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 PKIBQ9C010 78 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 PARP12Q9H0J9 701 aaKnown RBP4.2□□□□□ -1.74
USP53-206ENST00000510737 LINC00574Q9H8X3 128 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 ZC4H2Q9NQZ6 224 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 IDI2-AS1Q9NZ38 188 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 Q9UF83 564 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 TMEM5Q9Y2B1 443 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 LRP2P98164 4655 aa4.2□□□□□ -1.74
USP53-206ENST00000510737 IGKV1-27A0A075B6S5 117 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 TRAV24A0A0B4J272 114 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 C11orf94C9JXX5 98 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 FCN1O00602 326 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 ENTPD6O75354 484 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 IGLV3-1P01715 115 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 GYPBP06028 91 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 H2BFMP0C1H6 154 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 P0DMU3 169 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 FAM231AP0DMU4 169 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 FAM231CP0DMU5 169 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 CLUP10909 449 aa4.19□□□□□ -1.74
USP53-206ENST00000510737 CASQ1P31415 396 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms