RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 M0R1X1 148 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 DIRAS3O95661 229 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 LUMP51884 338 aaPredicted RBP13.91□□□□□ -0.18
TPM3-220ENST00000509601 GNB1P62873 340 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 DGCR2P98153 550 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 PLGLAQ15195 96 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 CDNFQ49AH0 187 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 PPP1R27Q86WC6 154 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 OR10J5Q8NHC4 309 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 CASTOR1Q8WTX7 329 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
TPM3-220ENST00000509601 ATG5Q9H1Y0 275 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 STUB1Q9UNE7 303 aa13.91□□□□□ -0.18
TPM3-220ENST00000509601 HUWE1Q7Z6Z7 4374 aaKnown RBP13.91□□□□□ -0.18
TPM3-220ENST00000509601 A0A1W2PN81 502 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 IGLV2-23P01705 113 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 CRYGBP07316 175 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 CHRNA7P36544 502 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
TPM3-220ENST00000509601 AKIRIN2Q53H80 203 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 PDPNQ86YL7 162 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 LFNGQ8NES3 379 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 FCGR1BQ92637 280 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 FLYWCH2Q96CP2 140 aaKnown RBP13.9□□□□□ -0.18
TPM3-220ENST00000509601 TSNAXQ99598 290 aaKnown RBP13.9□□□□□ -0.18
TPM3-220ENST00000509601 ALX4Q9H161 411 aaPredicted RBP13.9□□□□□ -0.18
TPM3-220ENST00000509601 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 Q9H521 79 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.9□□□□□ -0.18
TPM3-220ENST00000509601 FOXA2Q9Y261 457 aaPredicted RBP13.9□□□□□ -0.18
TPM3-220ENST00000509601 A3GALT2U3KPV4 340 aa13.9□□□□□ -0.18
TPM3-220ENST00000509601 SEC14L6B5MCN3 397 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
TPM3-220ENST00000509601 RAMP3O60896 148 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 SPDEFO95238 335 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 CA2P00918 260 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
TPM3-220ENST00000509601 ARFRP1Q13795 201 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 TPRA1Q86W33 373 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 TCTEX1D1Q8N7M0 179 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
TPM3-220ENST00000509601 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
TPM3-220ENST00000509601 SRRM4A7MD48 611 aaKnown RBP13.88□□□□□ -0.19
TPM3-220ENST00000509601 SLC25A17O43808 307 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 APOA2P02652 100 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 TALDO1P37837 337 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 LGALS7P47929 136 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 ZNF616Q08AN1 781 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 ZNF773Q6PK81 442 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 UNQ5815/PRO19632Q6UWF5 114 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
TPM3-220ENST00000509601 RNF167Q9H6Y7 350 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 SSR3Q9UNL2 185 aa13.88□□□□□ -0.19
TPM3-220ENST00000509601 TNCP24821 2201 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 SORL1Q92673 2214 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 OR8U8P0C7N1 319 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 PJVKQ0ZLH3 352 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 FXYD3Q14802 87 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 ARL6IP1Q15041 203 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 MRGPRG-AS1Q2M3A8 158 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 ZNF260Q3ZCT1 412 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 ACTBL2Q562R1 376 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 HACD4Q5VWC8 232 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 BVESQ8NE79 360 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 DCUN1D4Q92564 292 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 RHOVQ96L33 236 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 MS4A10Q96PG2 267 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
TPM3-220ENST00000509601 RRP15Q9Y3B9 282 aaKnown RBP13.87□□□□□ -0.19
TPM3-220ENST00000509601 LSM4Q9Y4Z0 139 aaKnown RBP13.87□□□□□ -0.19
TPM3-220ENST00000509601 DTYMKP23919 212 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 SDC2P34741 201 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 SFXN4Q6P4A7 337 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 DDB2Q92466 427 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 DLX4Q92988 240 aaPredicted RBP13.86□□□□□ -0.19
TPM3-220ENST00000509601 B9D2Q9BPU9 175 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 GINS4Q9BRT9 223 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 ST6GALNAC5Q9BVH7 336 aa13.86□□□□□ -0.19
TPM3-220ENST00000509601 KMT2CQ8NEZ4 4911 aaKnown RBP13.86□□□□□ -0.19
TPM3-220ENST00000509601 LINC00473A8K010 186 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 LGALS1P09382 135 aaKnown RBP13.85□□□□□ -0.19
TPM3-220ENST00000509601 DUTP33316 252 aaKnown RBP13.85□□□□□ -0.19
TPM3-220ENST00000509601 ECI1P42126 302 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 TAGLNQ01995 201 aaKnown RBP13.85□□□□□ -0.19
TPM3-220ENST00000509601 PYHIN1Q6K0P9 492 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 C11orf87Q6NUJ2 197 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 ARPC1AQ92747 370 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 PRR25Q96S07 402 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 CENPOQ9BU64 300 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 DCSTAMPQ9H295 470 aa13.85□□□□□ -0.19
TPM3-220ENST00000509601 IGHV4OR15-8A0A075B7B6 117 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 A0A087WW49 117 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 LINC01619G3V211 115 aa13.84□□□□□ -0.19
TPM3-220ENST00000509601 SSX5O60225 188 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms