RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HSPB1P04792 205 aaKnown RBP9.64□□□□□ -0.87
PDPN-208ENST00000509009 CD3GP09693 182 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 OR8U9P0C7N5 309 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 GSTT2P0CG29 244 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 GSTT2BP0CG30 244 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 SERPINB10P48595 397 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 FXYD3Q14802 87 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 SSX1Q16384 188 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 MOGAT2Q3SYC2 334 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 PYHIN1Q6K0P9 492 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 PDPNQ86YL7 162 aa9.64□□□□□ -0.87
PDPN-208ENST00000509009 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.64□□□□□ -0.87
PDPN-208ENST00000509009 FLYWCH2Q96CP2 140 aaKnown RBP9.64□□□□□ -0.87
PDPN-208ENST00000509009 IFITM5A6NNB3 132 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 M0R1X1 148 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 RAB27BO00194 218 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 BET1O15155 118 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SLC25A17O43808 307 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SAP30O75446 220 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SPDEFO95238 335 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 IGLV2-23P01705 113 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 APOA2P02652 100 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 CRYGBP07316 175 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SPNP16150 400 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 CD40LGP29965 261 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 LGALS7P47929 136 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 OR10A3P58181 314 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 PJVKQ0ZLH3 352 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 ACSM6Q6P461 480 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 OR5T1Q8NG75 326 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SLC35D1Q9NTN3 355 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SDHAF2Q9NX18 166 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
PDPN-208ENST00000509009 TRBV6-7A0A0A0MS04 114 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 TRDV1A0A1B0GX56 115 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 PDCD5O14737 125 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 TRGV3P03979 118 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 FCGR3AP08637 254 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 GNB3P16520 340 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 TPPP2P59282 170 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 SSBP2P81877 361 aaPredicted RBP9.62□□□□□ -0.87
PDPN-208ENST00000509009 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
PDPN-208ENST00000509009 TBCEQ15813 527 aaPredicted RBP9.62□□□□□ -0.87
PDPN-208ENST00000509009 ZNF367Q7RTV3 350 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 CNBD2Q96M20 576 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 CABLES2Q9BTV7 478 aa9.62□□□□□ -0.87
PDPN-208ENST00000509009 ZNF230Q9UIE0 474 aaPredicted RBP9.62□□□□□ -0.87
PDPN-208ENST00000509009 A0A0B4J203 849 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 SRRM4A7MD48 611 aaKnown RBP9.61□□□□□ -0.87
PDPN-208ENST00000509009 MFNGO00587 321 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 CNIH1O95406 144 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 DIRAS3O95661 229 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 HIST1H1DP16402 221 aaKnown RBP9.61□□□□□ -0.87
PDPN-208ENST00000509009 RAB6AP20340 208 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 GADD45AP24522 165 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 TMEM177Q53S58 311 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 IZUMO2Q6UXV1 221 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 BVESQ8NE79 360 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 MAFIPQ8WZ33 124 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 OR2D2Q9H210 308 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 VCX3BQ9H321 246 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 ZNF355PQ9NSJ1 428 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 NDUFB11Q9NX14 153 aa9.61□□□□□ -0.87
PDPN-208ENST00000509009 A0A075B6Q4 140 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 IGKV1D-8A0A087WSZ0 117 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 METTL21EPA6NDL7 271 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 GP9P14770 177 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 RAB3BP20337 219 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 HSPA13P48723 471 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 TAGLNQ01995 201 aaKnown RBP9.6□□□□□ -0.87
PDPN-208ENST00000509009 SRSF7Q16629 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDPN-208ENST00000509009 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 Q6ZS49 121 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 NR2C2APQ86WQ0 139 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 SBSPONQ8IVN8 264 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 POC5Q8NA72 575 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 OR6Q1Q8NGQ2 317 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 OR4C12Q96R67 309 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
PDPN-208ENST00000509009 BLOC1S6Q9UL45 172 aa9.6□□□□□ -0.87
PDPN-208ENST00000509009 TNCP24821 2201 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 C13orf42A0A1B0GVH6 325 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 H3BUA1 57 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 SHOXO15266 292 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 BRI3O95415 125 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 GALP22466 123 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 MYL9P24844 172 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 TALDO1P37837 337 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 PITPNAQ00169 270 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 ARFRP1Q13795 201 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 KLF5Q13887 457 aaPredicted RBP9.59□□□□□ -0.87
PDPN-208ENST00000509009 CDNFQ49AH0 187 aa9.59□□□□□ -0.87
PDPN-208ENST00000509009 C22orf42Q6IC83 251 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms