RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MCRIP2Q9BUT9 160 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-228ENST00000508974 GPR61Q9BZJ8 451 aa11.54□□□□□ -0.56
UBE2D3-228ENST00000508974 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
UBE2D3-228ENST00000508974 RRP15Q9Y3B9 282 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-228ENST00000508974 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-228ENST00000508974 IGKV1D-8A0A087WSZ0 117 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 LOC100506127A0A0U1RQW1 187 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 SLC25A17O43808 307 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 SOX15O60248 233 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 RBBP9O75884 186 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 CA2P00918 260 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 IGLV1-40P01703 118 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 CLEC2LP0C7M8 214 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 FGF9P31371 208 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 SERPINB10P48595 397 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 GNB1P62873 340 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 EGFEM1PQ0D2K5 195 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 CDNFQ49AH0 187 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 LGALS14Q8TCE9 139 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 C5orf30Q96GV9 206 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 YTHDF1Q9BYJ9 559 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 ALX4Q9H161 411 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 SDHAF2Q9NX18 166 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
UBE2D3-228ENST00000508974 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 SDC2P34741 201 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 RAB9AP51151 201 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF660Q6AZW8 331 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 SFXN4Q6P4A7 337 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 UNQ5815/PRO19632Q6UWF5 114 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 PPP1R27Q86WC6 154 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 MINDY2Q8NBR6 621 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 NUDCD2Q8WVJ2 157 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 MS4A10Q96PG2 267 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 TSNAXQ99598 290 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
UBE2D3-228ENST00000508974 TMEM235A6NFC5 223 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 EGR2P11161 476 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 TPRA1Q86W33 373 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 PDPNQ86YL7 162 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 BVESQ8NE79 360 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 LFNGQ8NES3 379 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 OR1N2Q8NGR9 330 aa11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-228ENST00000508974 I3L521 148 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 CD36P16671 472 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 PJVKQ0ZLH3 352 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 FHL3Q13643 280 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 ACTBL2Q562R1 376 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 ARPC1AQ92747 370 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 RNF5Q99942 180 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 CENPOQ9BU64 300 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 TOLLIPQ9H0E2 274 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
UBE2D3-228ENST00000508974 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 SPDEFO95238 335 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 CNIH1O95406 144 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 GNG2P59768 71 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 DGCR2P98153 550 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF616Q08AN1 781 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 TMEM267Q0VDI3 215 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 CBX3Q13185 183 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 FXYD3Q14802 87 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF260Q3ZCT1 412 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 IDNKQ5T6J7 187 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 C9orf66Q5T8R8 295 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 HACD4Q5VWC8 232 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 OR5H6Q8NGV6 325 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 PRR25Q96S07 402 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 RHBDL2Q9NX52 303 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 COL7A1Q02388 2944 aa11.49□□□□□ -0.57
UBE2D3-228ENST00000508974 SHOXO15266 292 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 IGLV2-23P01705 113 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 NFYAP23511 347 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 DTYMKP23919 212 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 TGFBR1P36897 503 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 ECI1P42126 302 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 SLURP1P55000 103 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 TPPP2P59282 170 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 ARL6IP1Q15041 203 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 KCTD21Q4G0X4 260 aa11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms