RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PCF11O94913 1555 aaKnown RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 IGKV1-12A0A0C4DH73 117 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 PQLC2LA1A4F0 135 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 A6NED7 52 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 A8MWP4 228 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 DENRO43583 198 aaKnown RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 GSTZ1O43708 216 aaPredicted RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 NOS1APO75052 506 aaPredicted RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 HAND1O96004 215 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 IGKV1D-33P01593 117 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 IGKV1-33P01594 117 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 IGKV1D-12P01611 117 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 OPN1SWP03999 348 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 G0S2P27469 103 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 TGFBR2P37173 567 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 GNG10P50151 68 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 PSME3P61289 254 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 BTN3A2P78410 334 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 BSPH1Q075Z2 132 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 APOFQ13790 326 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 PDGFRLQ15198 375 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 ACOT6Q3I5F7 207 aaPredicted RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 LIN52Q52LA3 116 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 FAM201AQ5SY85 155 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 SLC25A44Q96H78 314 aaPredicted RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 DOK5Q9P104 306 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 MRPS16Q9Y3D3 137 aaKnown RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 PXMP4Q9Y6I8 212 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 S4R3C0 116 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 GRIN2BQ13224 1484 aa2.33□□□□□ -2.04
DHFR-204ENST00000508282 BAZ1BQ9UIG0 1483 aaKnown RBP2.33□□□□□ -2.04
DHFR-204ENST00000508282 CAMSAP1Q5T5Y3 1602 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 TMED7-TICAM2A0A0A6YYA0 188 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 ZNF98A6NK75 572 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 A8MUU9 505 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 K7EM74 188 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 FSTL3O95633 263 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 HLA-DQB2P05538 268 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CGB3P0DN86 165 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CGB7P0DN87 165 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CD34P28906 385 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CRABP2P29373 138 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 OPRM1P35372 400 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 AKR1C2P52895 323 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 FABP9Q0Z7S8 132 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 SNCBQ16143 134 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 LRP11Q86VZ4 500 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 LY6G5BQ8NDX9 201 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 OR10X1Q8NGY0 326 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 OR2T27Q8NH04 317 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 LHFPL5Q8TAF8 219 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 KLF14Q8TD94 323 aaPredicted RBP2.32□□□□□ -2.04
DHFR-204ENST00000508282 TBX5Q99593 518 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 SIGMAR1Q99720 223 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CMSS1Q9BQ75 279 aaKnown RBP2.32□□□□□ -2.04
DHFR-204ENST00000508282 KIFC1Q9BW19 673 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 ULBP3Q9BZM4 244 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 DCSTAMPQ9H295 470 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 NMNAT1Q9HAN9 279 aaPredicted RBP2.32□□□□□ -2.04
DHFR-204ENST00000508282 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
DHFR-204ENST00000508282 ANAPC10Q9UM13 185 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 PRELID3BQ9Y3B1 194 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 V9GYQ6 96 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 EIF3AQ14152 1382 aaKnown RBP2.32□□□□□ -2.04
DHFR-204ENST00000508282 CHD5Q8TDI0 1954 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 CCDC144AA2RUR9 1427 aa2.32□□□□□ -2.04
DHFR-204ENST00000508282 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 A0A087WUJ7 227 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 OR4C45A6NMZ5 311 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 TMEM238C9JI98 176 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
DHFR-204ENST00000508282 OR2B3O76000 313 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 APOMO95445 188 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CST2P09228 141 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CD7P09564 240 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CCL1P22362 96 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 ATP6V0CP27449 155 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 DAPP51397 102 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 HIST1H3AP68431 136 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 H3F3AP84243 136 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CDK10Q15131 360 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 TMEM42Q69YG0 159 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 ALKAL1Q6UXT8 129 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 BRD3OSQ6XYD6 125 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 C16orf47Q6ZP98 133 aaPredicted RBP2.31□□□□□ -2.04
DHFR-204ENST00000508282 C1orf174Q8IYL3 243 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 C3orf22Q8N5N4 141 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 HIST1H2BAQ96A08 127 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CPNE2Q96FN4 548 aaPredicted RBP2.31□□□□□ -2.04
DHFR-204ENST00000508282 SFRP2Q96HF1 295 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 SEC22CQ9BRL7 303 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CENPHQ9H3R5 247 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 ZNF391Q9UJN7 358 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 CARHSP1Q9Y2V2 147 aaKnown RBP2.31□□□□□ -2.04
DHFR-204ENST00000508282 ZNF532Q9HCE3 1301 aa2.31□□□□□ -2.04
DHFR-204ENST00000508282 ITGB4P16144 1822 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms