RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 NELFBQ8WX92 580 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 PATE1Q8WXA2 126 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 RNASE6Q93091 150 aaKnown RBP-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CCDC127Q96BQ5 260 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CMTM5Q96DZ9 223 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 VAT1Q99536 393 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 SERPINI1Q99574 410 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 APOL4Q9BPW4 351 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 BPIFA3Q9BQP9 254 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CCDC77Q9BR77 488 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TTTY13Q9BZ97 58 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR51B6Q9H340 312 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 FBXL15Q9H469 300 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CISHQ9NSE2 258 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 AHSPQ9NZD4 102 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR5AC2Q9NZP5 309 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TAAR3PQ9P1P4 343 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 RHBDD3Q9Y3P4 386 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TIMM9Q9Y5J7 89 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ABCA2Q9BZC7 2435 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ANKRD17O75179 2603 aaKnown RBP-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ABCC12Q96J65 1359 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 NEURL4Q96JN8 1562 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 A0A087WUU8 490 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TRAV14DV4A0A0A6YYC5 116 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TRAV38-1A0A0B4J264 116 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 A0A0J9YW62 118 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 BICDL2A1A5D9 508 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 NCF1BA6NI72 391 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TMEM212A6NML5 194 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 NCF1CA8MVU1 366 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TRAPPC2LH3BP13 241 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 K7EN84 100 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TXNDC9O14530 226 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 SHBGP04278 402 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TRGC1P0CF51 173 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR13C7P0DN81 318 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 CA5AP35218 305 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF93P35789 620 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 UGT2B10P36537 528 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 RPL28P46779 137 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 DNASE1L1P49184 302 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 HIST1H4AP62805 103 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 UBE2IP63279 158 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 HMGN5P82970 282 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 NDUFAF6Q330K2 333 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 FAM27BQ5VT28 67 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 RESP18Q5W5W9 173 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ASCL4Q6XD76 172 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF705AQ6ZN79 300 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 Q6ZS92 163 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 SLC13A5Q86YT5 568 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OFCC1Q8IZS5 231 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 RPP25LQ8N5L8 163 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR4K17Q8NGC6 315 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR2D3Q8NGH3 330 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR51H1Q8NH63 302 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR2AE1Q8NHA4 323 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 SGMS2Q8NHU3 365 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF675Q8TD23 568 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 GPX8Q8TED1 209 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 DOK4Q8TEW6 326 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 GLYATL2Q8WU03 294 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ZMYND19Q96E35 227 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF396Q96N95 335 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 PLIN2Q99541 437 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 C11orf70Q9BRQ4 267 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 MED18Q9BUE0 208 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 CHID1Q9BWS9 393 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 YIPF3Q9GZM5 350 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 FAM192AQ9GZU8 254 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 TMEM222Q9H0R3 208 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR2AG1Q9H205 316 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 OR51E2Q9H255 320 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 BLZF1Q9H2G9 400 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 CLSTN2Q9H4D0 955 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 C8orf33Q9H7E9 229 aaPredicted RBP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 AQRO60306 1485 aaKnown RBP eCLIP-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 KNTC1P50748 2209 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 BCORL1Q5H9F3 1711 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 PTPRDP23468 1912 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 CACNA1AO00555 2505 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 DCHS2Q6V1P9 2916 aa-0.44□□□□□ -2.48
CLOCK-207ENST00000508049 ABCA12Q86UK0 2595 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 KIF13BQ9NQT8 1826 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 KDM6BO15054 1643 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 TVP23AA6NH52 213 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 TRIM64CA6NLI5 447 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 CLDN25C9JDP6 229 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 H3BT86 120 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 M0R378 163 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 CDIPTO14735 213 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 UBE2L6O14933 153 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 CASC3O15234 703 aaKnown RBP-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 POLR3GO15318 223 aaPredicted RBP-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 ATP8B1O43520 1251 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 GMDSO60547 372 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 SHOX2O60902 331 aaPredicted RBP-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 HYPMO75409 117 aa-0.45□□□□□ -2.48
CLOCK-207ENST00000508049 STK16O75716 305 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms