RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DSCAMO60469 2012 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
DDX41-208ENST00000507955 UBE2KP61086 200 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 RPL23AP62750 156 aaKnown RBP12.09□□□□□ -0.47
DDX41-208ENST00000507955 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 AKR1C8PQ5T2L2 129 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 GCSAMQ8N6F7 178 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 TCTEX1D2Q8WW35 142 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 NINJ1Q92982 152 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 LEAP2Q969E1 77 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 GNPNAT1Q96EK6 184 aaPredicted RBP12.09□□□□□ -0.47
DDX41-208ENST00000507955 WASF3Q9UPY6 502 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 BTBD17A6NE02 478 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 TAS2R30P59541 319 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 Q3ZCU0 254 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 LSM10Q969L4 123 aaKnown RBP12.08□□□□□ -0.47
DDX41-208ENST00000507955 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 CLN8Q9UBY8 286 aa12.08□□□□□ -0.47
DDX41-208ENST00000507955 TGIF2-C20orf24A0A0A6YYL0 155 aa12.08□□□□□ -0.48
DDX41-208ENST00000507955 TLE1Q04724 770 aa12.08□□□□□ -0.48
DDX41-208ENST00000507955 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
DDX41-208ENST00000507955 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
DDX41-208ENST00000507955 NBASA2RRP1 2371 aa12.08□□□□□ -0.48
DDX41-208ENST00000507955 POLEQ07864 2286 aa12.08□□□□□ -0.48
DDX41-208ENST00000507955 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 PROP1O75360 226 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 IFNA17P01571 189 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
DDX41-208ENST00000507955 MMP9P14780 707 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 EDDM3BP56851 147 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 RTP5Q14D33 572 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 ZCCHC24Q8N2G6 241 aaKnown RBP12.07□□□□□ -0.48
DDX41-208ENST00000507955 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 RAB40CQ96S21 281 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 TRBV23-1A0A0A0MS06 115 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 ZNF737O75373 536 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 CLDN1O95832 211 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 CRYAAP02489 173 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
DDX41-208ENST00000507955 ITLN1Q8WWA0 313 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 RBKSQ9H477 322 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 DCAF16Q9NXF7 216 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 ODAMA1E959 279 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
DDX41-208ENST00000507955 C1orf185Q5T7R7 199 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 CDPF1Q6NVV7 123 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 VKORC1L1Q8N0U8 176 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 AGMATQ9BSE5 352 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
DDX41-208ENST00000507955 SPTA1P02549 2419 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 A0A087WWC5 75 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 C15orf65H3BRN8 121 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
DDX41-208ENST00000507955 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 ZNF134P52741 427 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
DDX41-208ENST00000507955 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
DDX41-208ENST00000507955 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 IGF2RP11717 2491 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 ZG16O60844 167 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 SLC25A6P12236 298 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 HOXA5P20719 270 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 NCR3LG1Q68D85 454 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 CISD2Q8N5K1 135 aaKnown RBP12.06□□□□□ -0.48
DDX41-208ENST00000507955 ZNF525Q8N782 197 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 TVP23CQ96ET8 276 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 GGACTQ9BVM4 153 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 ZNF665Q9H7R5 613 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 UNKLQ9H9P5 680 aaKnown RBP12.06□□□□□ -0.48
DDX41-208ENST00000507955 DOK5Q9P104 306 aa12.06□□□□□ -0.48
DDX41-208ENST00000507955 SRRM5B3KS81 715 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 ELLP55199 621 aaPredicted RBP12.05□□□□□ -0.48
DDX41-208ENST00000507955 NDUFA6P56556 154 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 KLF3P57682 345 aaPredicted RBP12.05□□□□□ -0.48
DDX41-208ENST00000507955 TLE4Q04727 773 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 TNFRSF9Q07011 255 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 ZNF674Q2M3X9 581 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 RPL39P5Q59GN2 51 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 C1orf229Q6ZS94 237 aaPredicted RBP12.05□□□□□ -0.48
DDX41-208ENST00000507955 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
DDX41-208ENST00000507955 SNRNP40Q96DI7 357 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms