RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 OR51D1Q8NGF3 324 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 OR4K13Q8NH42 304 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 MFSD8Q8NHS3 518 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 ANAPC10Q9UM13 185 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 PEG3Q9GZU2 1588 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 CACNA1DQ01668 2161 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 POLR1AO95602 1720 aaPredicted RBP1.95□□□□□ -2.1
USP53-204ENST00000507906 WRNQ14191 1432 aaPredicted RBP eCLIP1.95□□□□□ -2.1
USP53-204ENST00000507906 D6RAR5 112 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 CDS2O95674 445 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 HIST1H1EP10412 219 aaKnown RBP1.95□□□□□ -2.1
USP53-204ENST00000507906 CDKN2CP42773 168 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 LSM6P62312 80 aaKnown RBP1.95□□□□□ -2.1
USP53-204ENST00000507906 EMX1Q04741 257 aaPredicted RBP1.95□□□□□ -2.1
USP53-204ENST00000507906 RASL11AQ6T310 242 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 ZNF550Q7Z398 422 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 UMODL1-AS1Q8N2C9 162 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 OR5C1Q8NGR4 320 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 OR2T4Q8NH00 348 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 OR2T27Q8NH04 317 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 OPTNQ96CV9 577 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 HES4Q9HCC6 221 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 HHLA2Q9UM44 414 aa1.95□□□□□ -2.1
USP53-204ENST00000507906 SDHAF1A6NFY7 115 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 MT-CO2P00403 227 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 HLA-DQB2P05538 268 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 NPPCP23582 126 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 RANP62826 216 aaKnown RBP1.94□□□□□ -2.1
USP53-204ENST00000507906 CTAG1AP78358 180 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 PSG4Q00888 419 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 IFITM2Q01629 132 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 OR2F1Q13607 317 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 RGS21Q2M5E4 152 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 LGALS9BQ3B8N2 356 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 LGALS9CQ6DKI2 356 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 SPATA12Q7Z6I5 190 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 PPP1R14BQ96C90 147 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 CAPZA3Q96KX2 299 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 CXorf21Q9HAI6 301 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 SLC2A9Q9NRM0 540 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 MRPL16Q9NX20 251 aaKnown RBP1.94□□□□□ -2.1
USP53-204ENST00000507906 HEY1Q9Y5J3 304 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 HSPE1-MOB4S4R3N1 261 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 NCAPD3P42695 1498 aa1.94□□□□□ -2.1
USP53-204ENST00000507906 OR6C6A6NF89 314 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 INMT-MINDY4F8WBC2 141 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 SLC25A16P16260 332 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 TMEM176BQ3YBM2 270 aaPredicted RBP1.93□□□□□ -2.1
USP53-204ENST00000507906 BRD3OSQ6XYD6 125 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 C2orf91Q6ZV80 131 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 SLC51BQ86UW2 128 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 GPHB5Q86YW7 130 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 DAND5Q8N907 189 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 OR10A6Q8NH74 314 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 KLK6Q92876 244 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 MS4A6EQ96DS6 147 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 CPNE2Q96FN4 548 aaPredicted RBP1.93□□□□□ -2.1
USP53-204ENST00000507906 DIRAS2Q96HU8 199 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 CCDC42Q96M95 316 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 STACQ99469 402 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 MRPS26Q9BYN8 205 aaKnown RBP1.93□□□□□ -2.1
USP53-204ENST00000507906 SMDT1Q9H4I9 107 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 SNX12Q9UMY4 172 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 PXMP4Q9Y6I8 212 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 MINOS1-NBL1R4GNA1 71 aa1.93□□□□□ -2.1
USP53-204ENST00000507906 CACNA1SQ13698 1873 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 KMT2EQ8IZD2 1858 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 A0A1W2PQL4 384 aaPredicted RBP1.92□□□□□ -2.1
USP53-204ENST00000507906 C3orf84H3BNL1 204 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 M0R036 132 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 COX7A2LO14548 114 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 PSCAO43653 123 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 ZNF189O75820 626 aaPredicted RBP1.92□□□□□ -2.1
USP53-204ENST00000507906 APOMO95445 188 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 TCRBP04435 133 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 IFNA16P05015 189 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 CTSGP08311 255 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 LGALS3P17931 250 aaKnown RBP1.92□□□□□ -2.1
USP53-204ENST00000507906 MYL12AP19105 171 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 CRHBPP24387 322 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 DDTP30046 118 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 AKR1C2P52895 323 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 TAS2R45P59539 299 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 RAB5BP61020 215 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 TNFAIP6P98066 277 aaPredicted RBP1.92□□□□□ -2.1
USP53-204ENST00000507906 ZNF117Q03924 483 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 TAF9Q16594 264 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 FAM78BQ5VT40 261 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 LPCAT4Q643R3 524 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 DEFB125Q8N687 156 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 SGMS2Q8NHU3 365 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 CMTM2Q8TAZ6 248 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 FNDC9Q8TBE3 224 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 RPS4Y2Q8TD47 263 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 RAB2BQ8WUD1 216 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 SFRP2Q96HF1 295 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 NMNAT3Q96T66 252 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 CCL13Q99616 98 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms