RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CT45A5P0DMU8 189 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 CT45A7P0DMV0 189 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 EPHA1P21709 976 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 RRAS2P62070 204 aaPredicted RBP14.16□□□□□ -0.14
RNF4-209ENST00000507784 ZNF816Q0VGE8 651 aaPredicted RBP14.16□□□□□ -0.14
RNF4-209ENST00000507784 GPR157Q5UAW9 335 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 RUSC1-AS1Q66K80 236 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 FAM71F2Q6NXP2 309 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 MOB3BQ86TA1 216 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 LGI3Q8N145 548 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 GLYATL2Q8WU03 294 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 TMEM222Q9H0R3 208 aa14.16□□□□□ -0.14
RNF4-209ENST00000507784 IGHV1-69DA0A0B4J2H0 117 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 HMX3A6NHT5 357 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 GOSR2O14653 212 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 NPFFO15130 113 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 B3GALNT1O75752 331 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 AVPP01185 164 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 IGHV1-69P01742 117 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 UCP1P25874 307 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 KIR2DS2P43631 304 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 ZNF137PP52743 207 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 FCN2Q15485 313 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 TMEM268Q5VZI3 342 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 ZNF383Q8NA42 475 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 NABP2Q9BQ15 211 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 SLC35D1Q9NTN3 355 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 MGAT4CQ9UBM8 478 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 TBL2Q9Y4P3 447 aaKnown RBP14.15□□□□□ -0.14
RNF4-209ENST00000507784 MINOS1-NBL1R4GNA1 71 aa14.15□□□□□ -0.14
RNF4-209ENST00000507784 A0A0B4J2A0 478 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 LY6LH3BQJ8 138 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 H7C2Y5 167 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 APOA2P02652 100 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 HOXB5P09067 269 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 IGHV4-38-2P0DP08 117 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 SRPXP78539 464 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 LDLRAD2Q5SZI1 272 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 SELENOHQ8IZQ5 122 aaKnown RBP14.14□□□□□ -0.15
RNF4-209ENST00000507784 TCTEX1D1Q8N7M0 179 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 SHPKQ9UHJ6 478 aa14.14□□□□□ -0.15
RNF4-209ENST00000507784 IGHV3-72A0A0B4J1Y9 119 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 IGHV1-3A0A0C4DH29 117 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 FAM25EA8MYX2 175 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 CCSO14618 274 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 TXNL1O43396 289 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 RAMP3O60896 148 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 PAX6P26367 422 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 SAA4P35542 130 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 SSX2Q16385 188 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 RTL8BQ17RB0 113 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 C2orf68Q2NKX9 166 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 MIDNQ504T8 468 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 ZNF585BQ52M93 769 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 BRD3OSQ6XYD6 125 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 RNASE11Q8TAA1 199 aaKnown RBP14.13□□□□□ -0.15
RNF4-209ENST00000507784 LHFPL5Q8TAF8 219 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 CD300LFQ8TDQ1 290 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 DDB2Q92466 427 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 ITPR2Q14571 2701 aa14.13□□□□□ -0.15
RNF4-209ENST00000507784 C13orf42A0A1B0GVH6 325 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 ADAP1O75689 374 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 S1PR2O95136 353 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 SIX6O95475 246 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 CRYZL1O95825 349 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 IFNA21P01568 189 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 RPA2P15927 270 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 LYZL2Q7Z4W2 148 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 OR4S2Q8NH73 311 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 C17orf50Q8WW18 174 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 RBMXL1Q96E39 390 aaKnown RBP14.12□□□□□ -0.15
RNF4-209ENST00000507784 MALSU1Q96EH3 234 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 TMEM56Q96MV1 263 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 TMEM56-RWDD3S4R434 201 aa14.12□□□□□ -0.15
RNF4-209ENST00000507784 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 H0YJW9 148 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 CDS2O95674 445 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 HPRT1P00492 218 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 SULT1A3P0DMM9 295 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 SULT1A4P0DMN0 295 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 RRASP10301 218 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 MC5RP33032 325 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 BRWD1-AS2P59051 145 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 TAGLNQ01995 201 aaKnown RBP14.11□□□□□ -0.15
RNF4-209ENST00000507784 KLF17Q5JT82 389 aaPredicted RBP14.11□□□□□ -0.15
RNF4-209ENST00000507784 CCDC144NLQ6NUI1 221 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 OR8H3Q8N146 312 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 DYNAPQ8N1N2 210 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 SLC35G3Q8N808 338 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 LRTM2Q8N967 370 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 OR11H7Q8NGC8 314 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 RBPMSQ93062 196 aaKnown RBP14.11□□□□□ -0.15
RNF4-209ENST00000507784 C18orf12Q96KH6 178 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 CHIAQ9BZP6 476 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 YAE1D1Q9NRH1 226 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 FAM212BQ9NTI7 297 aaPredicted RBP14.11□□□□□ -0.15
RNF4-209ENST00000507784 WASHC3Q9Y3C0 194 aa14.11□□□□□ -0.15
RNF4-209ENST00000507784 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms