RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 Q9N2K0 584 aa11.17□□□□□ -0.62
SEC24D-208ENST00000506622 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
SEC24D-208ENST00000506622 M0R1X1 148 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
SEC24D-208ENST00000506622 LINC00205P59089 165 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 MOGAT2Q3SYC2 334 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 Q8N1Y9 231 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 TMEM203Q969S6 136 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
SEC24D-208ENST00000506622 SCN3BQ9NY72 215 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 RDH8Q9NYR8 311 aa11.16□□□□□ -0.62
SEC24D-208ENST00000506622 ANKRD34BA5PLL1 514 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 TRDCB7Z8K6 153 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 H0Y980 276 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 SLC17A2O00624 439 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 LGALS7P47929 136 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 VEGFCP49767 419 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 TMEM50BP56557 158 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
SEC24D-208ENST00000506622 RAB11BQ15907 218 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 LIPKQ5VXJ0 399 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.62
SEC24D-208ENST00000506622 UFD1Q92890 307 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 ISOC1Q96CN7 298 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 TMEM68Q96MH6 324 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 VCXQ9H320 206 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 SLC35D1Q9NTN3 355 aa11.15□□□□□ -0.62
SEC24D-208ENST00000506622 LSM2Q9Y333 95 aaKnown RBP11.15□□□□□ -0.62
SEC24D-208ENST00000506622 A8MZ25 164 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 AADACP22760 399 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 RANBP1P43487 201 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 SERPINB10P48595 397 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 CBX3Q13185 183 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
SEC24D-208ENST00000506622 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
SEC24D-208ENST00000506622 ZFAND6Q6FIF0 208 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 OR56B1Q8NGI3 324 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 PECRQ9BY49 303 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 C19orf73Q9NVV2 129 aa11.14□□□□□ -0.63
SEC24D-208ENST00000506622 AK6Q9Y3D8 172 aaKnown RBP11.14□□□□□ -0.63
SEC24D-208ENST00000506622 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 LCE6AA0A183 80 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
SEC24D-208ENST00000506622 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 TRAM1Q15629 374 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 GFI1Q99684 422 aa11.13□□□□□ -0.63
SEC24D-208ENST00000506622 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
SEC24D-208ENST00000506622 CASQ2O14958 399 aaPredicted RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 BET1O15155 118 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 CD3GP09693 182 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 HSMCR30P0CW71 290 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 TAGLNQ01995 201 aaKnown RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 C2orf76Q3KRA6 126 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 GTSCR1Q86UQ5 136 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 SPATA25Q9BR10 227 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 TINAGL1Q9GZM7 467 aaPredicted RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 COA4Q9NYJ1 87 aa11.12□□□□□ -0.63
SEC24D-208ENST00000506622 PLECQ15149 4684 aaKnown RBP11.12□□□□□ -0.63
SEC24D-208ENST00000506622 SHOXO15266 292 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 FABP7O15540 132 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 BRI3O95415 125 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 IFNA6P05013 189 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 CRYGBP07316 175 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 PSMA1P25786 263 aaKnown RBP11.11□□□□□ -0.63
SEC24D-208ENST00000506622 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
SEC24D-208ENST00000506622 PSMD7P51665 324 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 CLDN12P56749 244 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
SEC24D-208ENST00000506622 TPBGQ13641 420 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 RTL8BQ17RB0 113 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 PLAC9Q5JTB6 97 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 PHB2Q99623 299 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 EDA2RQ9HAV5 297 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 SDHAF2Q9NX18 166 aa11.11□□□□□ -0.63
SEC24D-208ENST00000506622 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
SEC24D-208ENST00000506622 ERICH4A6NGS2 130 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 RRASP10301 218 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 RPS25P62851 125 aaKnown RBP11.1□□□□□ -0.63
SEC24D-208ENST00000506622 IRF3Q14653 427 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 HAGHQ16775 308 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
SEC24D-208ENST00000506622 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms