RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 STUB1Q9UNE7 303 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 SLC25A17O43808 307 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 SSX5O60225 188 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 TFAP2AP05549 437 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 CRYGBP07316 175 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 MC5RP33032 325 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 TGFBR1P36897 503 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 DEFA5Q01523 94 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF660Q6AZW8 331 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF773Q6PK81 442 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 NUDCD2Q8WVJ2 157 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 PRR25Q96S07 402 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 DAPK2Q9UIK4 370 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF221Q9UK13 617 aa12.95□□□□□ -0.34
PDLIM7-215ENST00000506161 LINC00473A8K010 186 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 J3QRK9 145 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 GADD45AP24522 165 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 SDC2P34741 201 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 SLURP1P55000 103 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 RPS16P62249 146 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 MXD1Q05195 221 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 PLGLAQ15195 96 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 CDNFQ49AH0 187 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 PPP1R27Q86WC6 154 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 CHCHD6Q9BRQ6 235 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 SLC35D1Q9NTN3 355 aa12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-215ENST00000506161 IGHV4OR15-8A0A075B7B6 117 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 A0A087WW49 117 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 TMEM235A6NFC5 223 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 RBBP9O75884 186 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 RUNX1Q01196 453 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 ARFRP1Q13795 201 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 SFXN4Q6P4A7 337 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 PDPNQ86YL7 162 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 BVESQ8NE79 360 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 OR1N2Q8NGR9 330 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 ABHD5Q8WTS1 349 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 DDB2Q92466 427 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 MS4A10Q96PG2 267 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
PDLIM7-215ENST00000506161 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 RBMXL2O75526 392 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 PTHLHP12272 177 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 NEDD8Q15843 81 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 Q6ZS49 121 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 FCGR1BQ92637 280 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 RNF5Q99942 180 aa12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-215ENST00000506161 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 SERPINB10P48595 397 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 DGCR2P98153 550 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF616Q08AN1 781 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 ZNF562Q6V9R5 426 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 FLYWCH2Q96CP2 140 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 LSM4Q9Y4Z0 139 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-215ENST00000506161 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 SPDEFO95238 335 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 APOA2P02652 100 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 DTYMKP23919 212 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 FXYD3Q14802 87 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 TMEM177Q53S58 311 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 ACTBL2Q562R1 376 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 DPF1Q92782 380 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 GPHA2Q96T91 129 aa12.9□□□□□ -0.34
PDLIM7-215ENST00000506161 TSNAXQ99598 290 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms