RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZFP41Q8N8Y5 198 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR4D6Q8NGJ1 314 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR51A4Q8NGJ6 313 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RHOXF1Q8NHV9 184 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RTN4IP1Q8WWV3 396 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 FCGR1BQ92637 280 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 FGGYQ96C11 551 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 COQ2Q96H96 371 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 CNBD2Q96M20 576 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR14A2Q96R54 314 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 NR1H4Q96RI1 486 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF184Q99676 751 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM70Q9BUB7 260 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 BARHL1Q9BZE3 327 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 METTL9Q9H1A3 318 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RNF167Q9H6Y7 350 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 LINC00574Q9H8X3 128 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SPACA1Q9HBV2 294 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM138Q9NPI0 162 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MRPS18AQ9NVS2 196 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RBFOX1Q9NWB1 397 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TECRQ9NZ01 308 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 FRRS1LQ9P0K9 344 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 AASSQ9UDR5 926 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 UBQLN2Q9UHD9 624 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RAB26Q9ULW5 256 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GAB2Q9UQC2 676 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GSTK1Q9Y2Q3 226 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 AMMECR1Q9Y4X0 333 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 X6R8D5 127 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 A0A1W2PPE3 182 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM30CPA0ZSE6 113 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ODAMA1E959 279 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM213A2RRL7 107 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 J3QRE1 110 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GABRPO00591 440 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CRTAPO75718 401 aaPredicted RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 NDUFA3O95167 84 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 HTR3BO95264 441 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ATP6V1G2O95670 118 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 OR2H2O95918 312 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TRGV3P03979 118 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CSN2P05814 226 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 UBBP0CG47 229 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GTF2F2P13984 249 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CELP19835 753 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CBLN1P23435 193 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 NFYBP25208 207 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 IL3RAP26951 378 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PSMB9P28065 219 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ETV1P50549 477 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GTF2A1P52655 376 aaPredicted RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 RBM11P57052 281 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 RPS27AP62979 156 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CX3CL1P78423 397 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 SSBP2P81877 361 aaPredicted RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 MRPS15P82914 257 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 SCN1BQ07699 218 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 MLLT11Q13015 90 aaPredicted RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PDZK1IP1Q13113 114 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF146Q15072 292 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 SPHARQ15513 63 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 UBE2V2Q15819 145 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF124Q15973 351 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 C5orf64Q2M2E5 130 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 RPEL1Q2QD12 228 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TIMM50Q3ZCQ8 353 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 SLC22A6Q4U2R8 563 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 AKIRIN2Q53H80 203 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ACTBL2Q562R1 376 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 KRBOX4Q5JUW0 171 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 C6orf141Q5SZD1 244 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ATAD3CQ5T2N8 411 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 C6orf183Q5T699 404 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GLT8D1Q68CQ7 371 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 DMKNQ6E0U4 476 aaPredicted RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 LIN54Q6MZP7 749 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TRAT1Q6PIZ9 186 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 MOB1BQ7L9L4 216 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PRSS48Q7RTY5 328 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 RDH10Q8IZV5 341 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 MS4A15Q8N5U1 240 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PXT1Q8NFP0 134 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 OR6M1Q8NGM8 313 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 OR13C5Q8NGS8 318 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 OR10AC1Q8NH08 325 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 OR4A5Q8NH83 315 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 DYNLRB2Q8TF09 96 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GHSRQ92847 366 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 MUL1Q969V5 352 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GALNT14Q96FL9 552 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 FAM210BQ96KR6 192 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PGLYRP3Q96LB9 341 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 DERL3Q96Q80 235 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 UQCC2Q9BRT2 126 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 FAM103A1Q9BTL3 118 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM59Q9BXS4 323 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 CSTL1Q9H114 145 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ISG20L2Q9H9L3 353 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms