RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 RPL39P5Q59GN2 51 aa17.31■□□□□ 0.36
TTC39B-204ENST00000505732 TCF23Q7RTU1 214 aa17.31■□□□□ 0.36
TTC39B-204ENST00000505732 H2BFWTQ7Z2G1 175 aa17.31■□□□□ 0.36
TTC39B-204ENST00000505732 KDF1Q8NAX2 398 aaPredicted RBP17.31■□□□□ 0.36
TTC39B-204ENST00000505732 CD300LFQ8TDQ1 290 aa17.31■□□□□ 0.36
TTC39B-204ENST00000505732 GFOD1Q9NXC2 390 aa17.31■□□□□ 0.36
TTC39B-204ENST00000505732 F8W036 122 aa17.3■□□□□ 0.36
TTC39B-204ENST00000505732 TRIM77I1YAP6 450 aa17.3■□□□□ 0.36
TTC39B-204ENST00000505732 TMPRSS2O15393 492 aa17.3■□□□□ 0.36
TTC39B-204ENST00000505732 RUNX1Q01196 453 aa17.3■□□□□ 0.36
TTC39B-204ENST00000505732 SPANXN5Q5MJ07 72 aa17.3■□□□□ 0.36
TTC39B-204ENST00000505732 RNASE6Q93091 150 aaKnown RBP17.3■□□□□ 0.36
TTC39B-204ENST00000505732 GNPNAT1Q96EK6 184 aaPredicted RBP17.3■□□□□ 0.36
TTC39B-204ENST00000505732 POLEQ07864 2286 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 FCGR3BO75015 233 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 CD5P06127 495 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 ARL16Q0P5N6 197 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 C10orf91Q5T1B1 145 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 ST6GALNAC3Q8NDV1 305 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 FAM213BQ8TBF2 198 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 TRAV38-1A0A0B4J264 116 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 MARCH11A6NNE9 402 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 FAM90A27PA6NNH2 459 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 CCL21O00585 134 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 SNCAP37840 140 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 CT45A1Q5HYN5 189 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 CT45A3Q8NHU0 189 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 ABHD14AQ9BUJ0 271 aa17.29■□□□□ 0.36
TTC39B-204ENST00000505732 SPTA1P02549 2419 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 A0A1W2PPE3 182 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 UMAD1C9J7I0 102 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 TMEM178BH3BS89 294 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 ITGB1BP1O14713 200 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 NFYBP25208 207 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 C1orf229Q6ZS94 237 aaPredicted RBP17.28■□□□□ 0.36
TTC39B-204ENST00000505732 LINC01560Q8TB33 94 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 CCL17Q92583 94 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 CORO2AQ92828 525 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
TTC39B-204ENST00000505732 RAI1Q7Z5J4 1906 aaPredicted RBP17.27■□□□□ 0.36
TTC39B-204ENST00000505732 NKX6-3A6NJ46 265 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 ZNF729A6NN14 1252 aaPredicted RBP17.27■□□□□ 0.36
TTC39B-204ENST00000505732 IFNA5P01569 189 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 NDUFB7P17568 137 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 RAB7AP51149 207 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 DVL1P1P54792 670 aaPredicted RBP17.27■□□□□ 0.36
TTC39B-204ENST00000505732 GUCA2BQ16661 112 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 C1orf87Q8N0U7 546 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 R3HDM4Q96D70 268 aa17.27■□□□□ 0.36
TTC39B-204ENST00000505732 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.27■□□□□ 0.35
TTC39B-204ENST00000505732 C9JQL5 133 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 HPRT1P00492 218 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 CD3EP07766 207 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 CHRNB4P30926 498 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 SLC25A24Q6NUK1 477 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 SVBPQ8N300 66 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 COMMD1Q8N668 190 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 ZNF525Q8N782 197 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 SEC11CQ9BY50 192 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 LINC00574Q9H8X3 128 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 DYNLRB1Q9NP97 96 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 IDI2-AS1Q9NZ38 188 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 GAB2Q9UQC2 676 aa17.27■□□□□ 0.35
TTC39B-204ENST00000505732 CARHSP1Q9Y2V2 147 aaKnown RBP17.27■□□□□ 0.35
TTC39B-204ENST00000505732 PPIAL4EA0A075B759 164 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 PPIAL4DF5H284 164 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 RBMXL2O75526 392 aaKnown RBP17.26■□□□□ 0.35
TTC39B-204ENST00000505732 PPIAL4FP0DN26 164 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 HBG1P69891 147 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 HBG2P69892 147 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 THNSL2Q86YJ6 484 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 NKX6-2Q9C056 277 aaPredicted RBP17.26■□□□□ 0.35
TTC39B-204ENST00000505732 TMEM106BQ9NUM4 274 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 SLC25A10Q9UBX3 287 aaPredicted RBP17.26■□□□□ 0.35
TTC39B-204ENST00000505732 NDRG3Q9UGV2 375 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 PPIAL4AQ9Y536 164 aa17.26■□□□□ 0.35
TTC39B-204ENST00000505732 MMP23AO75900 390 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 GRNP28799 593 aaKnown RBP17.25■□□□□ 0.35
TTC39B-204ENST00000505732 APOBEC3AP31941 199 aaPredicted RBP17.25■□□□□ 0.35
TTC39B-204ENST00000505732 FBXL19-AS1Q494R0 122 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 TMEM14EPQ6UXP3 125 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 PUSL1Q8N0Z8 303 aaKnown RBP17.25■□□□□ 0.35
TTC39B-204ENST00000505732 S1PR3Q99500 378 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 MS4A5Q9H3V2 200 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 PRELID3BQ9Y3B1 194 aa17.25■□□□□ 0.35
TTC39B-204ENST00000505732 hADV38S2A0JD32 116 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 PLAUP00749 431 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 SFTA3P0C7M3 94 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 ZNF439Q8NDP4 499 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 DTD1Q8TEA8 209 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 ZDHHC16Q969W1 377 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 SCRT1Q9BWW7 348 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 FBXO7Q9Y3I1 522 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 DSCAML1Q8TD84 2053 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 SAA2-SAA4A0A096LPE2 208 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 A0A1B0GV50 99 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 FAM157AC9JC47 383 aa17.24■□□□□ 0.35
TTC39B-204ENST00000505732 NUPL2O15504 423 aaKnown RBP17.24■□□□□ 0.35
TTC39B-204ENST00000505732 RBFOX2O43251 390 aaKnown RBP eCLIP17.24■□□□□ 0.355e-6■■■■□ 20.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms