RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 PALMDQ9NP74 551 aa12.41□□□□□ -0.42
GAPDHP40-201ENST00000505218 MCUBQ9NWR8 336 aa12.41□□□□□ -0.42
GAPDHP40-201ENST00000505218 VSIG4Q9Y279 399 aa12.41□□□□□ -0.42
GAPDHP40-201ENST00000505218 NDUFB6O95139 128 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 IGHV4-59P01825 116 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 INPP1P49441 399 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 THBS3P49746 956 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 RAB13P51153 203 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 DRAXINQ8NBI3 349 aaPredicted RBP12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 OR5R1Q8NH85 324 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 TCF19Q9Y242 345 aa12.4□□□□□ -0.42
GAPDHP40-201ENST00000505218 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 CENPXA8MT69 81 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 BRS3P32247 399 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 MC5RP33032 325 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 CCR6P51684 374 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 ARHGDIBP52566 201 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 BAMBIQ13145 260 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 RBMS2Q15434 407 aaKnown RBP12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 SLC9A3R2Q15599 337 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 GLDNQ6ZMI3 551 aaPredicted RBP12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 RNF5Q99942 180 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 SLC2A9Q9NRM0 540 aa12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
GAPDHP40-201ENST00000505218 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 LINC00854A0A1B0GVQ3 168 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 H3BUX3 64 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 SNRNP70P08621 437 aaKnown RBP12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 DHODHQ02127 395 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 TMEM177Q53S58 311 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 PDPNQ86YL7 162 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 CMTM1Q8IZ96 169 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 RITA1Q96K30 269 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 SCGB3A2Q96PL1 93 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 GPHA2Q96T91 129 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 PLSCR3Q9NRY6 295 aa12.38□□□□□ -0.43
GAPDHP40-201ENST00000505218 DNAJC9-AS1A6NH13 148 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 MPPED1O15442 326 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 IGKV1-16P04430 117 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 RRASP10301 218 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 PGAM2P15259 253 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 PI3P19957 117 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 CD24P25063 80 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 F2RP25116 425 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 MECP2P51608 486 aaKnown RBP12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 ZNF585BQ52M93 769 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 KCTD9Q7L273 389 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
GAPDHP40-201ENST00000505218 TNFSF12O43508 249 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 MOSP00540 346 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 IGKV1D-33P01593 117 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 IGKV1-33P01594 117 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 VSIG10L2P0DP72 767 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 PIGPP57054 158 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 DHRS7BQ6IAN0 325 aaPredicted RBP12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 TBC1D26Q86UD7 250 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 NPBQ8NG41 125 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 GALNT14Q96FL9 552 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 RBM14Q96PK6 669 aaKnown RBP12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 CHIAQ9BZP6 476 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
GAPDHP40-201ENST00000505218 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 SRRM4A7MD48 611 aaKnown RBP12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 CHST1O43916 411 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 OR2F2O95006 317 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 NDUFA3O95167 84 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 TCRBP04435 133 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 AMY1AP04745 511 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 RLN1P04808 185 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 KIR2DS2P43631 304 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 SUPT4H1P63272 117 aaKnown RBP12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 CATR1Q13166 79 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 MZT2BQ6NZ67 158 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 RBMS3Q6XE24 437 aaKnown RBP12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
GAPDHP40-201ENST00000505218 SLC25A42Q86VD7 318 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms